DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and RYa-R

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001287552.1 Gene:RYa-R / 43253 FlyBaseID:FBgn0004842 Length:518 Species:Drosophila melanogaster


Alignment Length:367 Identity:109/367 - (29%)
Similarity:178/367 - (48%) Gaps:50/367 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SNSSGNNYAFTSEHT----DHSDHNAN----------DSMEYDAESVALERIV--STIVPVFFGI 83
            ::..|:||.:.|..|    ....:|..          |.:..|..|.|..:|:  ...:|:|.  
  Fly    55 ADDEGSNYGYGSTTTLSGLQFETYNITVMMNFSCDDYDLLSEDMWSSAYFKIIVYMLYIPIFI-- 117

  Fly    84 IGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATD-YVLPEWPFGNVWC 147
              || |:|||.|..:|.:..:||:.||..|.:||:.|||...||||.:... ::|..||||...|
  Fly   118 --FA-LIGNGTVCYIVYSTPRMRTVTNYFIASLAIGDILMSFFCVPSSFISLFILNYWPFGLALC 179

  Fly   148 KFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALS 212
            .||.|...|:...|.||||.:|.||::|::.|:....  |:|.||..|...|...:.||:|:.:.
  Fly   180 HFVNYSQAVSVLVSAYTLVAISIDRYIAIMWPLKPRI--TKRYATFIIAGVWFIALATALPIPIV 242

  Fly   213 HSVRI--YQYHGNAGTACVFSTEEEIW----SLVGFQVSFFLSSYVAPLTLICFLYMGMLARLW- 270
            ..:.|  ..:|    |.|......|:|    ....:.:|.|...:|.||.::.|.|..:..|:| 
  Fly   243 SGLDIPMSPWH----TKCEKYICREMWPSRTQEYYYTLSLFALQFVVPLGVLIFTYARITIRVWA 303

  Fly   271 KSAPG-CKPSAESR--KGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHLSVI--IQI 330
            |..|| .:.:.:.|  :.||::.:|::.||:.|..||||.:::.:|  ||....:|...:  :..
  Fly   304 KRPPGEAETNRDQRMARSKRKMVKMMLTVVIVFTCCWLPFNILQLL--LNDEEFAHWDPLPYVWF 366

  Fly   331 ISHVVAYTNSCINPILYAFLSDNFRKAFRKVV--------WC 364
            ..|.:|.::.|.|||:|.:::..||..|.:::        ||
  Fly   367 AFHWLAMSHCCYNPIIYCYMNARFRSGFVQLMHRMPGLRRWC 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 95/295 (32%)
TM helix 1 76..102 CDD:320224 10/25 (40%)
TM helix 2 109..135 CDD:320224 12/26 (46%)
TM helix 3 147..177 CDD:320224 14/29 (48%)
TM helix 4 189..209 CDD:320224 7/19 (37%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 10/29 (34%)
TM helix 7 326..351 CDD:320224 7/26 (27%)
RYa-RNP_001287552.1 7tmA_PR4-like 106..394 CDD:320514 96/300 (32%)
TM helix 1 107..133 CDD:320514 10/30 (33%)
TM helix 2 140..165 CDD:320514 12/24 (50%)
TM helix 3 179..209 CDD:320514 14/29 (48%)
TM helix 4 220..241 CDD:320514 7/20 (35%)
TM helix 5 271..300 CDD:320514 7/28 (25%)
TM helix 6 320..350 CDD:320514 11/31 (35%)
TM helix 7 362..387 CDD:320514 7/24 (29%)

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