DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-24

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001023670.2 Gene:srx-24 / 3565787 WormBaseID:WBGene00005915 Length:301 Species:Caenorhabditis elegans


Alignment Length:222 Identity:42/222 - (18%)
Similarity:84/222 - (37%) Gaps:41/222 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 IGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDI------LFVIFCVPFTATDYVLPEWPF 142
            :...|::.|.||:..:.....|:::..::..||||.:|      ||.:|.:....:..::....|
 Worm    14 VSLFGIVINFLVLFSIGKTVSMKNSFGIITKNLAVCNIVMCGLGLFFLFPMQLAPSSVLVDNSHF 78

  Fly   143 GNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAI 207
            ..|..::..       ..|.::..|:|.:||.|:..|:....:.........:...|        
 Worm    79 VGVVSEYFY-------ENSNFSHFLVSLNRFCAMYLPLYYAPIFCVTKTKFYLTFLW-------- 128

  Fly   208 PVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVS-----------FFLSSYVAPLTL---I 258
            .|::.....||:.     ..|....:.:.|:|...::|           |.:::.:..:||   :
 Worm   129 AVSIIGCTAIYEV-----ANCHLEYDADFWNLQFIKISELCEEITWYSDFLINAVLTLITLSLDL 188

  Fly   259 CFLYMG-MLARLWKSAPGCKPSAESRK 284
            ...|.| .|:|....|.|.:.|...||
 Worm   189 LAAYKGRKLSRALLGAAGLEVSEVQRK 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 28/161 (17%)
7tm_1 91..347 CDD:278431 41/215 (19%)
srx-24NP_001023670.2 TM helix 1 8..32 CDD:341315 4/17 (24%)
7TM_GPCR_Srx 12..275 CDD:370981 42/222 (19%)
TM helix 2 39..65 CDD:341315 8/25 (32%)
TM helix 3 77..106 CDD:341315 8/35 (23%)
TM helix 4 119..136 CDD:341315 2/24 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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