DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-80

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001023915.1 Gene:srx-80 / 3564918 WormBaseID:WBGene00005971 Length:323 Species:Caenorhabditis elegans


Alignment Length:331 Identity:62/331 - (18%)
Similarity:120/331 - (36%) Gaps:92/331 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 MEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFV 124
            |.:..::..|....::::.    |.|..|:..|.|:|...:.:...|::.||:....||.:.:.:
 Worm     1 MSFSPDADPLNWFAASVMT----INGVFGITCNTLIIASFIRSPTERTSFNLICSYRAVGNCIIL 61

  Fly   125 IF-----CVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLV-----LMSFDRFLAVVHP 179
            ::     .||.|.         ||:.....:...||:||..|:|..:     |::.:||.|:..|
 Worm    62 LWGFLGTFVPITL---------FGDTLFPPIYQFIVLTCVNSLYAGLQYCGFLIAINRFCAMYIP 117

  Fly   180 VTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQV 244
            :...:|...:          ||.:.|.:         |:          |:...:.|..|:.:  
 Worm   118 MFYSTLFGVK----------ITFILTTL---------IF----------VYRIVKIIMELIHY-- 151

  Fly   245 SFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAI-CWLPIH 308
                      :.|.||.........|  ||..  ....||....|...::::....|| |...:.
 Worm   152 ----------IPLQCFSSFSSYDISW--APAM--DERCRKYGGVVDESLLILGTLVAINCATFVK 202

  Fly   309 VILVLKALNLYGGS-----------HLSVIIQIISHVV--AYT---NSCINPILYAFLSDNFRKA 357
            :.|..||..|....           .:..|||.:::::  .:|   :..|:...:.|:|.:|   
 Worm   203 IYLFYKATELDSREVKEKMKKNRILFIQTIIQDLTYIIDLIFTFQLSGLISARYWTFISGSF--- 264

  Fly   358 FRKVVW 363
                :|
 Worm   265 ----IW 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 34/166 (20%)
7tm_1 91..347 CDD:278431 53/282 (19%)
srx-80NP_001023915.1 7TM_GPCR_Srx 20..281 CDD:370981 60/308 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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