DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-84

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001256336.1 Gene:srx-84 / 353451 WormBaseID:WBGene00005975 Length:325 Species:Caenorhabditis elegans


Alignment Length:257 Identity:45/257 - (17%)
Similarity:93/257 - (36%) Gaps:66/257 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDIL-----FVIFCVPFTA 132
            ::.:..||..:.|..|.:.|.|:|.:.:.:...|::.|::.:...:.:.:     |:...:|.| 
 Worm    13 INILAAVFIFVNGIMGTVTNLLIIYIFIKSPTERTSFNVICVFRGIGNTIILTWGFLATFLPIT- 76

  Fly   133 TDYVLPEWPFGNVWCKFVQYMIVVTCHCSV----YTLVLMSFDRFLAVVHPVTSMSLRTERNATL 193
               ::...||.    .|.:.:::...:...    ||.|.::.:||.|:..|.....:...:...|
 Worm    77 ---LIGASPFS----PFYETLVIGFSNSLYSGLQYTGVYIALNRFCAMFFPTYYPKIFDFKITFL 134

  Fly   194 AIMCAWI------------------TIVTTAIPVALSHSV----RIYQYHGNAGTACVFSTEEEI 236
            ..:..:|                  .:|.|:..:|.|.::    :......|..|:.:|.|    
 Worm   135 ITLLMFIYRFVKIILEFFHYIPLECWMVYTSYDLAWSPNMGEQCKDDDNSSNINTSAIFQT---- 195

  Fly   237 WSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVL 298
             .||....:.|...|        |.|              |.:..|.||::|..:...|:.|
 Worm   196 -VLVILNAAIFAKIY--------FFY--------------KSTDLSTKGRKRKLKKNKVLFL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 30/187 (16%)
7tm_1 91..347 CDD:278431 41/239 (17%)
srx-84NP_001256336.1 TM helix 1 18..42 CDD:341315 7/23 (30%)
7TM_GPCR_Srx 22..286 CDD:370981 43/248 (17%)
TM helix 2 49..76 CDD:341315 3/26 (12%)
TM helix 3 88..118 CDD:341315 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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