DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and mchr1a

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_001343144.1 Gene:mchr1a / 353181 ZFINID:ZDB-GENE-030502-4 Length:353 Species:Danio rerio


Alignment Length:328 Identity:91/328 - (27%)
Similarity:154/328 - (46%) Gaps:35/328 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 DHSDHNANDSMEYDAESVALERIVST-------IVPVFFGIIGFAGLLGNGLVILVVVAN---QQ 104
            |..:.:.|.|:.....|..::  |:|       |:|..||||.|.|:.||.:|:..::..   |.
Zfish     2 DFPEDSENSSLRLSNSSKQIQ--VNTDDQYGNAILPSIFGIICFLGISGNSIVVYTIIKKTKCQA 64

  Fly   105 MRSTTNLLIINLAVSDILFVIFCVPFTATDYV-LPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLM 168
            .::..::.|.||::.|:||:: .:||.....: ...|.||...||.:..:...:...|.|.|.:|
Zfish    65 KQTVPDIFIFNLSIVDLLFLL-GMPFLIHQLLGNGSWCFGATMCKVISALDSNSQTVSTYILTVM 128

  Fly   169 SFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTE 233
            :.||::|.|||.....:||...|:..:...|...:.:..|| |.::..:..:.|..|  |.....
Zfish   129 TLDRYVATVHPFRFNHVRTTCVASAVVAAVWALSLISITPV-LMYTGLMPLHSGQVG--CALLLP 190

  Fly   234 EEIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVL 298
            ....::..|.:..|:.::..|||:||.::..:|..:..:.....|..:..:.| .||||.|.:.|
Zfish   191 NPSTNICWFTIYQFVLAFALPLTIICVVFFKILKHMSTTVAPLPPRNQQVRTK-SVTRMAVAICL 254

  Fly   299 AFAICWLPIHVILVLKALNLYGGSHL-----SVIIQIISHV---VAYTNSCINPILYAFLSDNFR 355
            ||.|||.|.:::.::         ||     |.....:.||   :.|.||||||.||..||..|:
Zfish   255 AFFICWAPYYILQIV---------HLGIQKPSASFYYVYHVAISMGYANSCINPFLYIILSKTFK 310

  Fly   356 KAF 358
            :.|
Zfish   311 RQF 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 41/160 (26%)
7tm_1 91..347 CDD:278431 71/267 (27%)
mchr1aXP_001343144.1 7tm_GPCRs 33..313 CDD:333717 84/293 (29%)
TM helix 1 34..58 CDD:320095 10/23 (43%)
TM helix 2 70..91 CDD:320095 8/21 (38%)
TM helix 3 108..130 CDD:320095 5/21 (24%)
TM helix 4 153..169 CDD:320095 1/15 (7%)
TM helix 5 197..220 CDD:320095 7/22 (32%)
TM helix 6 243..268 CDD:320095 13/25 (52%)
TM helix 7 281..306 CDD:320095 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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