DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and TrissinR

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster


Alignment Length:572 Identity:120/572 - (20%)
Similarity:204/572 - (35%) Gaps:203/572 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGHQSLALLLATLISSWPKASWGATGN--GSIISVSNSSGNNY-------------AFT------ 45
            :.|....|:|.||:|:   ::..|:.|  .:|....|.|..:|             |.|      
  Fly    97 SAHWKTLLILLTLLSA---STLTASANVTSTISPPINGSSTDYILLYGESTTSLVPALTTGLSGD 158

  Fly    46 -SEHTDHSDHNANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTT 109
             |......:.:|..:.||..:...:..|..|:..:.|....|    ||.||||||..::::||.|
  Fly   159 GSGAVIEDEEDAEKASEYIFDRTDVRIIFITLYTLVFCCCFF----GNLLVILVVTLSRRLRSIT 219

  Fly   110 NLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFL 174
            |..:.|||.:|....:|||....:.|::..|.||...|:..|::..::...|::.||::..:|:.
  Fly   220 NFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYF 284

  Fly   175 AVVHPVTSMSLRTERNATLAIMCAWITIVTTAIP-VALSHSVR-IYQYHGNAGTACVFSTEEEIW 237
            |:|||:|...:.|.....:.|:..|||....:.| ...|.::: |:...|.....||.  :.|::
  Fly   285 AIVHPITCKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDGQEEEICVL--DREMF 347

  Fly   238 SLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPG--------------------------- 275
            :.....:..|:..||.||.::..||..:...||:|:.|                           
  Fly   348 NSKLLDMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHN 412

  Fly   276 ----------------------------------------------------------------- 275
                                                                             
  Fly   413 SMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEK 477

  Fly   276 ------------CKPSAES--------RK------------------------------------ 284
                        ||.|.|:        ||                                    
  Fly   478 RGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHS 542

  Fly   285 ------GKRRVTRMVVVVVLAFAICWLPIHVILVLK--ALNLYGGSHLSVIIQIISHVVAYTNSC 341
                  .:|.|.||:::.||.||:|.||.|...:.:  :.:..|.|:.:.::..::.:|.|.||.
  Fly   543 SSNVLRARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSG 607

  Fly   342 INPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQQVTKTTRTATGNGTSNIEM 393
            :||:||||||.||||..::::.|              :.:...|..:||..|
  Fly   608 VNPLLYAFLSRNFRKGMKELLLC--------------SWKKGKGKSSSNSSM 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 47/158 (30%)
7tm_1 91..347 CDD:278431 83/413 (20%)
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 43/139 (31%)
7tm_1 201..>385 CDD:278431 56/185 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.