DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and Ptgdr2

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001012070.1 Gene:Ptgdr2 / 309212 RGDID:1311986 Length:403 Species:Rattus norvegicus


Alignment Length:333 Identity:85/333 - (25%)
Similarity:141/333 - (42%) Gaps:63/333 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HNANDSMEY-DAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRST-TNLLIINL 116
            :::|.|:.| |..||.|.           |:....||:.|||::.||  ..:||.| ....:::|
  Rat    21 NHSNSSLRYIDHVSVLLH-----------GLASLLGLVENGLILFVV--GCRMRQTVVTTWVLHL 72

  Fly   117 AVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVT 181
            |:||:|.......||....|...|..|..:||....:..:....|.:.|..:|.||.|.||.||.
  Rat    73 ALSDLLAAASLPFFTYFLAVGHSWELGTTFCKLHSSVFFLNMFASGFLLSAISLDRCLQVVRPVW 137

  Fly   182 SMSLRTERNATLAIMCAWITIVTTAIPVALSHSV------RIYQYHG----NAG----TACVFST 232
            :.:.||...|....:..|...|...:|..:....      ||..|:.    |.|    |.|.:..
  Rat   138 AQNHRTVAAAHRVCLMLWALAVLNTVPYFVFRDTIPRRDGRIMCYYNMLLLNPGSDRDTTCDYRQ 202

  Fly   233 EEEIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRV---TRMVV 294
            :       ...||.||.:::.||.:|...::.:..:|            ..:|::|.   .|:|.
  Rat   203 K-------ALAVSKFLLAFMVPLAIIASSHVAVSLQL------------HHRGRQRTGRFVRLVA 248

  Fly   295 VVVLAFAICWLPIHVILVLKALNLYGGSH-LSVIIQIISH------VVAYTNSCINPILYAFLSD 352
            .:|:||.:||.|.|:..:|:|     .:| ::.:.|:.|.      .:|:.||.:||:||.....
  Rat   249 AIVVAFILCWGPYHIFSLLEA-----RAHSVTTLRQLASRGLPFVTSLAFFNSVVNPLLYVLTCP 308

  Fly   353 NFRKAFRK 360
            :.....|:
  Rat   309 DMLHKLRR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 77/307 (25%)
TM helix 1 76..102 CDD:320224 8/25 (32%)
TM helix 2 109..135 CDD:320224 7/25 (28%)
TM helix 3 147..177 CDD:320224 8/29 (28%)
TM helix 4 189..209 CDD:320224 3/19 (16%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 11/32 (34%)
TM helix 7 326..351 CDD:320224 9/30 (30%)
Ptgdr2NP_001012070.1 7tm_GPCRs 32..314 CDD:475119 80/318 (25%)
TM helix 1 34..58 CDD:410628 11/36 (31%)
TM helix 2 66..87 CDD:410628 5/20 (25%)
TM helix 3 104..126 CDD:410628 3/21 (14%)
TM helix 4 149..165 CDD:410628 2/15 (13%)
TM helix 5 203..226 CDD:410628 7/29 (24%)
TM helix 6 244..266 CDD:410628 9/21 (43%)
TM helix 7 282..307 CDD:410628 8/24 (33%)
Involved in the recycling of CRTH2. /evidence=ECO:0000250 329..332
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..353
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 384..403
Blue background indicates that the domain is not in the aligned region.

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