DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and Rgr

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_038950404.1 Gene:Rgr / 306307 RGDID:1309174 Length:300 Species:Rattus norvegicus


Alignment Length:305 Identity:68/305 - (22%)
Similarity:113/305 - (37%) Gaps:79/305 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GII----GFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDI---LFVIFCVPFTATDYVLP- 138
            ||:    ..:|:..|||.|........:|:.:|||:::||::|.   |..:.....:....:|| 
  Rat    20 GIVLLMEALSGISLNGLTIFSFCKTPDLRTPSNLLVLSLALADTGISLNALVAAVSSLLRVILPI 84

  Fly   139 ----EWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAW 199
                .||.|:..|:...:....|...|:.....:::.|:   .|..|...|            ||
  Rat    85 VSHRRWPHGSEGCRVHGFQGFATALASICGSAAIAWGRY---HHYCTRRQL------------AW 134

  Fly   200 ITIVTTAIPVAL-----------------SHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSFF 247
                .||||:.|                 .|    |.|. ..||.|.........:.:.|..:..
  Rat   135 ----DTAIPLVLFVWLSSAFWASLPLMGWGH----YDYE-PVGTCCTLDYSRGDRNFISFLFTMA 190

  Fly   248 LSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVT-----RMVVVVVLAFAICWLPI 307
            ..:::.||.:....|..|..:|            ||.|..:|.     ||::       :.|.| 
  Rat   191 FFNFLVPLFITHTSYRFMEQKL------------SRSGHLQVNTTLPGRMLL-------LGWGP- 235

  Fly   308 HVILVLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSD 352
            :.:|.|.|. :...|.:|..:|::..::|.|...||.|.||..|:
  Rat   236 YALLYLYAA-VADVSFISPKLQMVPALIAKTMPTINAINYALRSE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 68/305 (22%)
TM helix 1 76..102 CDD:320224 7/23 (30%)
TM helix 2 109..135 CDD:320224 7/28 (25%)
TM helix 3 147..177 CDD:320224 4/29 (14%)
TM helix 4 189..209 CDD:320224 5/19 (26%)
TM helix 5 239..268 CDD:320224 5/28 (18%)
TM helix 6 284..314 CDD:320224 7/34 (21%)
TM helix 7 326..351 CDD:320224 8/24 (33%)
RgrXP_038950404.1 7tmA_Retinal_GPR 17..286 CDD:320200 68/305 (22%)
TM helix 1 18..44 CDD:320200 7/23 (30%)
TM helix 2 51..77 CDD:320200 7/25 (28%)
TM helix 3 97..127 CDD:320200 5/32 (16%)
TM helix 4 135..155 CDD:320200 5/19 (26%)
TM helix 5 182..211 CDD:320200 5/28 (18%)
TM helix 6 213..243 CDD:320200 10/37 (27%)
TM helix 7 253..278 CDD:320200 8/24 (33%)

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