DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and Pgr15l

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001100053.1 Gene:Pgr15l / 296867 RGDID:1562685 Length:456 Species:Rattus norvegicus


Alignment Length:360 Identity:103/360 - (28%)
Similarity:176/360 - (48%) Gaps:46/360 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SWGATGNGSIISVSNSSGNNYAFTSEHTDHSDHNANDSMEYDAESVALER-------IVSTIVPV 79
            ||       :.|:.:.|.|       ||..:..|.: |.|:......:.:       |::.||..
  Rat    27 SW-------VPSIEDQSCN-------HTTQNGTNIS-SAEWGGPRGTVTKWLGGNPHIMAKIVLT 76

  Fly    80 F-FGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFG 143
            | :.:|....|.||.||..|.|.:::.:.:|.|||.|||:||||.::...||....::..:|.||
  Rat    77 FAYAVIIVISLFGNSLVCQVFVKHKETKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVFG 141

  Fly   144 NVWC---KFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIM-CAWITIVT 204
            .:.|   :|.||   .:.|.|..||:.::.||...::||   |..|...:.:|.:: ..|...|.
  Rat   142 RIMCHVSRFAQY---CSLHVSTLTLMAVAMDRHRVILHP---MKPRLTHSQSLFVVGVIWSIAVF 200

  Fly   205 TAIPVALSHSV-RIYQYHGNAGTACVFSTEEEIWSLVGFQVSF--FLSSYVAPLTLICFLYMGML 266
            .|:|.|:..:: .:....|:..:.|:.|..... :||...|..  |:..|:.||.:|...|..:.
  Rat   201 LALPHAIYQNLFTLVNMDGDVRSYCLPSFPGPS-TLVSKYVDLGTFILLYILPLLVIVGTYSHLG 264

  Fly   267 ARLW-KSAPGCKPS----AESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHLSV 326
            .||| ::|.|...:    |..:|.|:.: ||::::||.||:||.|::..:||  ::..|..:.||
  Rat   265 KRLWIQNAIGDASARQLMAHYQKRKKSI-RMLILIVLVFAVCWFPLNFYVVL--ISSAGVENDSV 326

  Fly   327 IIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKV 361
            |.... |..|.:::|.||.:|.:|:.:||...|.:
  Rat   327 IFYAF-HWFAMSSTCYNPFIYCWLNRSFRAKLRSI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 91/295 (31%)
TM helix 1 76..102 CDD:320224 11/26 (42%)
TM helix 2 109..135 CDD:320224 13/25 (52%)
TM helix 3 147..177 CDD:320224 10/32 (31%)
TM helix 4 189..209 CDD:320224 4/20 (20%)
TM helix 5 239..268 CDD:320224 9/30 (30%)
TM helix 6 284..314 CDD:320224 12/29 (41%)
TM helix 7 326..351 CDD:320224 8/24 (33%)
Pgr15lNP_001100053.1 7tmA_GPR83 73..357 CDD:320511 91/294 (31%)
TM helix 1 74..100 CDD:320511 10/25 (40%)
TM helix 2 107..132 CDD:320511 13/24 (54%)
TM helix 3 145..175 CDD:320511 10/32 (31%)
TM helix 4 186..207 CDD:320511 5/20 (25%)
TM helix 5 237..266 CDD:320511 7/28 (25%)
TM helix 6 286..316 CDD:320511 13/32 (41%)
TM helix 7 325..350 CDD:320511 9/25 (36%)

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