DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and Ffar4

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001040553.1 Gene:Ffar4 / 294075 RGDID:1308252 Length:361 Species:Rattus norvegicus


Alignment Length:314 Identity:77/314 - (24%)
Similarity:134/314 - (42%) Gaps:36/314 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYV 136
            ::|.:.....|:|....|||| :..||:|..::.|..|..|::||..:|:||. ..:|.......
  Rat    38 VLSVLETTVLGLIFVVSLLGN-VCALVLVVRRRRRGATVSLVLNLFCADLLFT-SAIPLVLVVRW 100

  Fly   137 LPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWIT 201
            ...|..|.|.|..:.|::.::...::.||..:|.:|.:.:|.....:|....|.....:...|..
  Rat   101 TEAWLLGPVVCHLLFYVMTMSGSVTILTLAAVSLERMVCIVRLRRGLSGPGRRTQAALLAFIWGY 165

  Fly   202 IVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEI------W----SLVGFQVSFFLSSYVAPLT 256
            ....|:|:.:...|...:..|.         ::||      |    ..:.:.|.|...:::.|..
  Rat   166 SALAALPLCILFRVVPQRLPGG---------DQEIPICTLDWPNRIGEISWDVFFVTLNFLVPGL 221

  Fly   257 LICFLYMGML-------ARLWKSAPGCKPSAESRKGKR--RVTRMVVVVVLAFAICWLPIHVILV 312
            :|...|..:|       .||..|. ....|.:.|..::  |:.|.:.:::::|.|.|.|| :|.:
  Rat   222 VIVISYSKILQITKASRKRLTLSL-AYSESHQIRVSQQDYRLFRTLFLLMVSFFIMWSPI-IITI 284

  Fly   313 LKALNLYGGSHLSVIIQIISHVVAYT--NSCINPILYAFLSDNFRKAFRKVVWC 364
            |..|.......|.:...:...|||:|  ||.:|||||..  ..||..:||:..|
  Rat   285 LLILIQNFRQDLVIWPSLFFWVVAFTFANSALNPILYNM--SLFRSEWRKIFCC 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 73/303 (24%)
TM helix 1 76..102 CDD:320224 9/25 (36%)
TM helix 2 109..135 CDD:320224 8/25 (32%)
TM helix 3 147..177 CDD:320224 6/29 (21%)
TM helix 4 189..209 CDD:320224 3/19 (16%)
TM helix 5 239..268 CDD:320224 6/35 (17%)
TM helix 6 284..314 CDD:320224 8/31 (26%)
TM helix 7 326..351 CDD:320224 11/26 (42%)
Ffar4NP_001040553.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
7tm_classA_rhodopsin-like 43..321 CDD:410626 69/290 (24%)
TM helix 1 43..68 CDD:410626 9/25 (36%)
TM helix 2 74..99 CDD:410626 8/25 (32%)
TM helix 3 111..141 CDD:410626 6/29 (21%)
TM helix 4 154..173 CDD:410626 2/18 (11%)
TM helix 5 204..229 CDD:410626 5/24 (21%)
TM helix 6 257..290 CDD:410626 10/33 (30%)
TM helix 7 301..321 CDD:410626 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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