DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and Sstr1

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_033242.1 Gene:Sstr1 / 20605 MGIID:98327 Length:391 Species:Mus musculus


Alignment Length:363 Identity:104/363 - (28%)
Similarity:186/363 - (51%) Gaps:51/363 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SSWPKASWGATGNGSIISVSNSSGNNYAFTSEHTDHSDHNANDSMEYDAESVALERIVS------ 74
            ||.|..|.|:.|.|   :.|...|:              .|.|.||....:.:....:|      
Mouse    11 SSSPSPSPGSCGEG---ACSRGPGS--------------GAADGMEEPGRNASQNGTLSEGQGSA 58

  Fly    75 TIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPE 139
            .::...:.::...||.||.:||.|::...:|::.||:.|:|||::|.|.:: .|||..|..:|..
Mouse    59 ILISFIYSVVCLVGLCGNSMVIYVILRYAKMKTATNIYILNLAIADELLML-SVPFLVTSTLLRH 122

  Fly   140 WPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVT 204
            ||||.:.|:.|..:..|....|:|.|.::|.||::|||||:.:...|....|.:..:..|:..:.
Mouse   123 WPFGALLCRLVLSVDAVNMFTSIYCLTVLSVDRYVAVVHPIKAARYRRPTVAKVVNLGVWVLSLL 187

  Fly   205 TAIPVALSHSVRIYQYHGNAGTACVFSTEE--EIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLA 267
            ..:|:.:......   :.:...||.....|  :.| ||||.:..||..::.|:..||..|:.::|
Mouse   188 VILPIVVFSRTAA---NSDGTVACNMLMPEPAQRW-LVGFVLYTFLMGFLLPVGAICLCYVLIIA 248

  Fly   268 RL--------WKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHL 324
            ::        |:         :.::.:|::|.||::||:.|.|||:|.:|:   :.:|::.....
Mouse   249 KMRMVALKAGWQ---------QRKRSERKITLMVMMVVMVFVICWMPFYVV---QLVNVFAEQDD 301

  Fly   325 SVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVV 362
            :.:.| :|.::.|.|||.|||||.||||||:::|::::
Mouse   302 ATVSQ-LSVILGYANSCANPILYGFLSDNFKRSFQRIL 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 47/158 (30%)
7tm_1 91..347 CDD:278431 79/265 (30%)
Sstr1NP_033242.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 13/55 (24%)
7tmA_SSTR1 59..334 CDD:320636 89/292 (30%)
TM helix 1 60..86 CDD:320636 7/25 (28%)
TM helix 2 93..119 CDD:320636 12/26 (46%)
TM helix 3 130..160 CDD:320636 10/29 (34%)
TM helix 4 172..194 CDD:320636 3/21 (14%)
TM helix 5 220..249 CDD:320636 10/28 (36%)
TM helix 6 264..294 CDD:320636 12/32 (38%)
TM helix 7 302..327 CDD:320636 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.