DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and npr-32

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_503056.4 Gene:npr-32 / 190990 WormBaseID:WBGene00013782 Length:440 Species:Caenorhabditis elegans


Alignment Length:341 Identity:87/341 - (25%)
Similarity:156/341 - (45%) Gaps:58/341 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVV-----------ANQQMRSTTN-- 110
            |.|.|.....|:.:::....|.|.|    |.:|||.|||:::           |.::|.|:||  
 Worm    17 SNEDDTSRTTLKLVLAISYLVLFII----GTVGNGTVILMIINILTSMKRNVQAGKRMMSSTNHV 77

  Fly   111 -LLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFL 174
             :.::.|::.|:| ||..:||...|.:..:|.||...||...:...|....|.:.:.::|:||::
 Worm    78 FIYVLGLSIVDLL-VILHLPFLVVDLLKGQWLFGVAMCKVYWFGESVNKLLSSFLMTVLSWDRYM 141

  Fly   175 AVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYH------------------ 221
            ||..||.||.:|:  |||...:....||..|.:.:.:.:...:::..                  
 Worm   142 AVCSPVKSMKMRS--NATALKVLLACTIFATVLLLPVLYEAAVFKIDKMRMVPLLEGTEELAASD 204

  Fly   222 --GNAGTACVFSTEEEIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPG-------CK 277
              |...:.|:|..:      ..|.:..|:..:.||..||...|:.::..|.||:..       .|
 Worm   205 LAGTTMSKCMFDAD------ATFTLYTFVIGFAAPAFLIIIFYVQVIYALQKSSRNIRGARGISK 263

  Fly   278 PSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHLSVIIQ---IISHVVAYTN 339
            |...|.:.| :||:.:|.|:|.:.:||.|...:.::...||...|.::..:.   .::|::...|
 Worm   264 PDGSSNRVK-KVTKRIVAVILFYFLCWTPQWTLNIMSQFNLIAVSWMTPALSAMFFVAHLLVCFN 327

  Fly   340 SCINPILYAFLSDNFR 355
            |..||:|||:::...|
 Worm   328 SAANPVLYAYINRELR 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 83/325 (26%)
TM helix 1 76..102 CDD:320224 10/36 (28%)
TM helix 2 109..135 CDD:320224 9/28 (32%)
TM helix 3 147..177 CDD:320224 8/29 (28%)
TM helix 4 189..209 CDD:320224 6/19 (32%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 9/29 (31%)
TM helix 7 326..351 CDD:320224 8/27 (30%)
npr-32NP_503056.4 7tm_classA_rhodopsin-like 31..339 CDD:410626 82/321 (26%)
TM helix 1 31..63 CDD:410626 10/35 (29%)
TM helix 2 74..102 CDD:410626 9/28 (32%)
TM helix 3 114..144 CDD:410626 8/29 (28%)
TM helix 4 157..176 CDD:410626 4/18 (22%)
TM helix 5 218..243 CDD:410626 7/30 (23%)
TM helix 6 269..299 CDD:410626 9/30 (30%)
TM helix 7 314..339 CDD:410626 8/24 (33%)

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