DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-12

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_500029.2 Gene:srx-12 / 190306 WormBaseID:WBGene00005903 Length:305 Species:Caenorhabditis elegans


Alignment Length:302 Identity:59/302 - (19%)
Similarity:114/302 - (37%) Gaps:82/302 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSD--ILFVIFC---V 128
            ::.|.::|: :|  ::.|:|.:.|.|..:||:.|..:::....|..:..:::  :||| ||   .
 Worm     6 IDNIYASII-IF--LLSFSGCIFNLLAGIVVLKNPILKNAFGALCFSHTIANFGVLFV-FCTWVT 66

  Fly   129 PFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATL 193
            |.|...|...|..||    |.:..:.::..:...|:.:::|.:|||.:..|....||...||...
 Worm    67 PTTIIQYKYTELTFG----KILGQINILFWNACCYSHLVISSNRFLTISMPTKVSSLFNYRNTCF 127

  Fly   194 AIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLV------GFQVSFFLSSYV 252
            .|...|...:...||         |.:.    ..|..:.:...|:.|      |:.::.:...|.
 Worm   128 IIAFVWSMAIGHVIP---------YFWR----ETCYVAYDPVSWTWVFGDTPCGYIITTYTDYYT 179

  Fly   253 A-----PLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILV 312
            :     .::.:.|....||. |::.......:.|:|: :|||                       
 Worm   180 SVAIFVVMSTLDFSTFTMLV-LYRRKSHLTSNDETRR-RRRV----------------------- 219

  Fly   313 LKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNF 354
                                .:..:|.||:..||:.:...||
 Worm   220 --------------------EIRFFTQSCLQGILFFYEVFNF 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 37/161 (23%)
7tm_1 91..347 CDD:278431 51/271 (19%)
srx-12NP_500029.2 TM helix 1 12..36 CDD:341315 8/26 (31%)
7TM_GPCR_Srx 16..277 CDD:370981 57/291 (20%)
TM helix 2 43..69 CDD:341315 7/26 (27%)
TM helix 3 81..111 CDD:341315 7/33 (21%)
TM helix 4 124..143 CDD:341315 5/27 (19%)
TM helix 5 178..203 CDD:341315 5/25 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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