DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-116

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_506167.2 Gene:srx-116 / 189212 WormBaseID:WBGene00006007 Length:327 Species:Caenorhabditis elegans


Alignment Length:339 Identity:67/339 - (19%)
Similarity:128/339 - (37%) Gaps:99/339 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVV--ANQQ--------MRSTTNLL 112
            |.:.:..||.|..|||:.|:   ..:....|.:.|.:|:..::  .|::        ::|..|.:
 Worm     5 DDIFFTVESTASLRIVAAIL---LTVTSITGTIFNIIVLFAIIFRVNKKDGFLKICCLKSFGNSI 66

  Fly   113 IINLAVSDILFVIFCVPFT-ATDYVLPE-----------WPFGNVWCKFVQYMIVVTCHCSVYTL 165
            :.      |.::|:.||.| ..||.||.           |   ..||            ...::.
 Worm    67 VC------IGYLIWPVPVTFLNDYFLPHMFNAFMGQLVGW---FAWC------------IGPFSQ 110

  Fly   166 VLMSFDRFLAVVHP-VTSMSLRTERNATLAIMCAWITIVTTAIPVALS------HSVRIYQYHGN 223
            ||::.:|..||..| |.|.:.|...::...::|     :|.|..|.::      |.:...||.| 
 Worm   111 VLLTSNRIFAVFFPHVYSRNYRYAPSSFGILIC-----LTLAFIVFIAFFPEGCHFLYNLQYIG- 169

  Fly   224 AGTACVFSTEEEIWSLVG---FQVSFFLSSYVAPLTLIC--FLYMGMLARLWKSAPGCKPSAESR 283
                  :..||.:.:.|.   |.||.|:   :...|..|  .|::.::|..::.:   ....:|:
 Worm   170 ------WLPEESMCTSVRRVIFLVSMFI---IVIFTTFCGILLFLKLIADSFQQS---LAMTDSQ 222

  Fly   284 KGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYA 348
            ...||:.                 |...:|:.|...|    .:::..::..|.|  ...:.:.:.
 Worm   223 SSTRRLQ-----------------HQKNLLQTLVQNG----LILVDTLNTTVTY--QVFSLLFFQ 264

  Fly   349 FLSDNFRKAFRKVV 362
            |::..|...|.:.|
 Worm   265 FITLAFSMVFIRTV 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 37/185 (20%)
7tm_1 91..347 CDD:278431 54/289 (19%)
srx-116NP_506167.2 7TM_GPCR_Srx 27..287 CDD:370981 59/314 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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