DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-43

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_507022.2 Gene:srx-43 / 188374 WormBaseID:WBGene00005934 Length:319 Species:Caenorhabditis elegans


Alignment Length:322 Identity:61/322 - (18%)
Similarity:119/322 - (36%) Gaps:64/322 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IIGFAGLLGNGLVILVVVA---NQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWP--- 141
            ::....|.|..|::.|::.   ...::|...:|:||...:.::..|....|:....:|...|   
 Worm    28 VVSMECLTGLFLLVAVIIGCFRIAALKSPFGILMINQNCAQLMACINSGSFSTLGVLLNIKPVLS 92

  Fly   142 ----FGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITI 202
                |||    |..:::.|.    :.:.:||||:||.|...|:...:|.:.......|:..|:..
 Worm    93 ISYLFGN----FSIFLLPVI----LISFLLMSFNRFCACFFPLRYQNLFSSSMIRTFIVFNWLLS 149

  Fly   203 VTTAIPVALSHSVRIYQYH------GNAGTACVFSTEEEIWSLVGFQVSFFLSSYVAPLTLICFL 261
            :.....:.:........||      |:....|     ..:.||....:...||..:..|.::..:
 Worm   150 LVAGSYLVVVRECNFVFYHFGWLFAGSVSVKC-----GTLLSLYSISIQTVLSITIVGLDVVTLV 209

  Fly   262 -YMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAIC---WLPI-HVILVLKALN---- 317
             .|...:::::|     .|.|.|:.:...:..|::....| :|   |..: |.||   ..|    
 Worm   210 ALMAFRSKVYQS-----HSVEVRRRELSFSGQVIIQGAVF-LCHGAWYDMGHAIL---PGNDDRW 265

  Fly   318 --LYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQQVT 377
              .:..|..|.::.:...||.:.               |.|.||:.::.....|....:.||
 Worm   266 KFFFTTSFSSNLLHVFDPVVVFA---------------FNKEFRRWLFRNFNVPTAQKRIVT 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 33/172 (19%)
7tm_1 91..347 CDD:278431 53/282 (19%)
srx-43NP_507022.2 7tm_4 33..299 CDD:328797 58/302 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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