DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-16

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_504763.2 Gene:srx-16 / 188256 WormBaseID:WBGene00005907 Length:286 Species:Caenorhabditis elegans


Alignment Length:324 Identity:71/324 - (21%)
Similarity:120/324 - (37%) Gaps:87/324 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 IVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAV-SDILFVIFCVPFTATDYVLPE 139
            ||.:...::...|.:.|..|.:.......|.|:..::..|.|: :.|:.:||.:      |:||.
 Worm     6 IVAIITFLVTSLGTVANLAVFVAARRISSMNSSFGVITKNQAICNTIMCLIFLI------YILPL 64

  Fly   140 WPFGNVWCK-FVQYMIVVTCHC------SVYTL-----VLMSFDRFLAVVHPVTSMSLRTERNAT 192
            ..|.   .| ||:|     .||      :||.:     .|::|:||.||..|  |...|......
 Worm    65 QIFP---VKIFVRY-----SHCVGTAAMAVYEISNLSHFLIAFNRFCAVFLP--SYYERVFSPFG 119

  Fly   193 LAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSL----------VGFQVSFF 247
            ..:|...|.:|:|...|.|...|           ||.|..::..|||          :.:...|.
 Worm   120 TKVMTYIIWVVSTIWCVVLYEIV-----------ACHFKYDDASWSLAFLPSKKCTRLTWYSDFT 173

  Fly   248 LSSYVAPLT----LICFLYMGMLARLWKSAPGCKPSAESR------------KGKRRVTRMVVVV 296
            .::.:..:|    ||..:..|..:|:..:|.|.:.|...|            :|....|..|...
 Worm   174 FNTSLVVMTLCTNLITAIQAGRKSRMLMNAAGIRMSKRQRQRELNFIKQTFFQGTTIFTGQVTYY 238

  Fly   297 VLAFAICWLPIHVILVLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRK 360
            ::|      |:              ...|:||.|:..:.|:.::....|:.| .:...|..:||
 Worm   239 IIA------PL--------------LSNSIIIFIVGTLWAFMHAVEGGIILA-SNQEMRNTYRK 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 44/179 (25%)
7tm_1 91..347 CDD:278431 64/294 (22%)
srx-16NP_504763.2 TM helix 1 8..32 CDD:341315 3/23 (13%)
7TM_GPCR_Srx 12..272 CDD:370981 66/307 (21%)
TM helix 2 39..65 CDD:341315 8/31 (26%)
TM helix 3 77..106 CDD:341315 9/28 (32%)
TM helix 4 119..138 CDD:341315 5/18 (28%)
TM helix 5 164..188 CDD:341315 2/23 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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