DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and npr-20

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_495888.3 Gene:npr-20 / 188226 WormBaseID:WBGene00011578 Length:410 Species:Caenorhabditis elegans


Alignment Length:376 Identity:100/376 - (26%)
Similarity:167/376 - (44%) Gaps:81/376 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 ANDSMEYDAESVAL--ERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAV 118
            :|.:::.|..||:.  :..|...|.:.:.::....|.||.|.::|:.::..||:.||..:.|||:
 Worm    10 SNATLDDDPCSVSFIDQPFVKIPVMIIYCLVFVVCLSGNFLTLIVMTSHPMMRTPTNFFLSNLAI 74

  Fly   119 SDILFVIFC-----VPFTATDYVLPEWPFGNVWCK-FVQYMIVVTCHCSVYTLVLMSFDRFLAVV 177
            :|:|..|||     :.....|:  ..||.|.|.|| ::....::.| .|...|||:|.::::||:
 Worm    75 ADLLVAIFCILQNMIHIVGFDH--GNWPLGPVMCKLYLGLTNIMPC-TSAGILVLVSLEKYIAVL 136

  Fly   178 HPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGF 242
            ||::.:.|.|..:..:|.|..|:..:....|..|  ..:.|.|   .|.:..|.....||:    
 Worm   137 HPLSGLKLLTPEHRWVATMIVWVISILVNFPYFL--YAQNYTY---LGVSACFRGSMPIWN---- 192

  Fly   243 QVSF-FLSSYVAPLTLICFLYMGMLARLWKS---------------------------APGCK-- 277
              || |:..|:.|||.:.|:|..:...||.|                           .||..  
 Worm   193 --SFSFIVWYLIPLTALVFIYSRISHLLWTSDSNRQSSRQSHESNGSLERGNGYANTAQPGSSWQ 255

  Fly   278 -----------------PSAESR----------KGKRRVTRMVVVVVLAFAICWLPIHVILVLKA 315
                             |..|.:          :|:|:|.|::|.||::||:...|.|..|:..:
 Worm   256 MKNGRIVVYKQESLLNVPKREKKVKEPKRPKDTEGRRKVVRLLVAVVVSFALLTFPHHARLLYTS 320

  Fly   316 L--NLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWC 364
            .  .....|:.::|.|.:|::..:.:|.|||||||.||..||.|...|:.|
 Worm   321 FQTGTICNSNWTMIFQPLSYIFLFISSAINPILYACLSKRFRNALSDVIHC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 47/162 (29%)
7tm_1 91..347 CDD:278431 83/320 (26%)
npr-20NP_495888.3 7tmA_Trissin_R 32..365 CDD:320140 92/346 (27%)
TM helix 1 33..57 CDD:320140 6/23 (26%)
TM helix 2 66..88 CDD:320140 9/21 (43%)
TM helix 3 107..129 CDD:320140 6/22 (27%)
TM helix 4 152..168 CDD:320140 3/15 (20%)
TM helix 5 189..212 CDD:320140 10/28 (36%)
TM helix 6 292..317 CDD:320140 10/24 (42%)
TM helix 7 333..358 CDD:320140 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159406
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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