DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-34

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_504804.2 Gene:srx-34 / 187944 WormBaseID:WBGene00005925 Length:294 Species:Caenorhabditis elegans


Alignment Length:327 Identity:62/327 - (18%)
Similarity:112/327 - (34%) Gaps:138/327 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GLLGNGLVILVVVANQQMR-------STTNLLIINLAVSDILF----VIFCVPFTATDYVLPEWP 141
            |.:.|.|::.:|:..:.:.       :|...|...:|..:::|    :||.:.|...:..:    
 Worm    18 GFITNWLIVKIVIQYRNLHRSFPIFTATVASLYAIMASFELMFASPMIIFDINFLKMNSTI---- 78

  Fly   142 FGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPV---TSMSLRTER-------NATLAIM 196
                 |..: |:|  |...:....|::|.:||:||..|.   |..:.||.|       ..:|.|:
 Worm    79 -----CGAI-YLI--TYDTTSLFHVVISINRFIAVFKPFSYNTVFNPRTTRVIIFSVITLSLLIV 135

  Fly   197 CAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSFFL---SSYVAPLTLI 258
            ..|:.|:.                       |.||.:|:.|:        ||   |.:       
 Worm   136 NCWLFIID-----------------------CRFSFDEDHWT--------FLVTDSDH------- 162

  Fly   259 CFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNL----- 318
            |.::      :|.:..|           :.:...:|.|:|         |||.::|.:.|     
 Worm   163 CDVF------VWTTILG-----------KNIILSIVNVIL---------HVITMIKVITLKQFKA 201

  Fly   319 -------YG-----------GSHLSVIIQIISHVV---AYTNSCINPILYAFLSDNFRKAFRKVV 362
                   |.           |..|.:.|:||:...   ::.|.     .:|||       |...:
 Worm   202 RTQVSRSYSLQESYFLKQTFGQTLFMSIEIIAFYFPPRSFENE-----YFAFL-------FSMFL 254

  Fly   363 WC 364
            ||
 Worm   255 WC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 35/172 (20%)
7tm_1 91..347 CDD:278431 55/305 (18%)
srx-34NP_504804.2 TM helix 1 6..32 CDD:341315 4/13 (31%)
7TM_GPCR_Srx 12..270 CDD:370981 62/327 (19%)
TM helix 2 38..68 CDD:341315 5/29 (17%)
TM helix 3 83..106 CDD:341315 8/24 (33%)
TM helix 4 118..138 CDD:341315 5/19 (26%)
TM helix 5 171..191 CDD:341315 7/39 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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