DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-29

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_506904.2 Gene:srx-29 / 187057 WormBaseID:WBGene00005920 Length:292 Species:Caenorhabditis elegans


Alignment Length:238 Identity:50/238 - (21%)
Similarity:92/238 - (38%) Gaps:58/238 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 IVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDIL-FVIFCVPFTATDYVLPE 139
            :|.....|:...|:|.|.:::|.:.....|..:..::..|.|:.:|| ..||.|      ||.| 
 Worm     6 VVSAITFIVSLIGILSNIVLVLAIRKTYSMNGSFGIITKNQAICNILTCAIFLV------YVFP- 63

  Fly   140 WPFGNVWCKFVQYMIVV------TCHCSVYTL-----VLMSFDRFLAVVHPVTSMSLRTERNATL 193
                 :..::...||.:      || .::|.:     :|::.:||..:........|.:..|..:
 Worm    64 -----LQVRYSPPMIHISHYVGNTC-MTIYEISNLSHLLIALNRFCVLFFQHRYEQLFSNPNTVI 122

  Fly   194 AIMCAWIT-IVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSFFLSSYV----- 252
            .....||| |:..|:         .|::     :.|........||. .|:.|.|..|.:     
 Worm   123 MRNYLWITCIIFCAV---------CYEF-----SKCFLKYNPNHWSF-EFENSDFCDSLIWYSDF 172

  Fly   253 ---APLTLICFLYMGML--------ARLWKSAPGCKPSAESRK 284
               ..:.:|. |::.:|        :|:..:|.|.|.||..|:
 Worm   173 LFNTGIDIIT-LFLNLLTAYKGRKQSRVLINAAGLKVSAIQRR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 35/169 (21%)
7tm_1 91..347 CDD:278431 46/223 (21%)
srx-29NP_506904.2 TM helix 1 8..32 CDD:341315 5/23 (22%)
7TM_GPCR_Srx 12..274 CDD:370981 49/232 (21%)
TM helix 2 39..61 CDD:341315 7/27 (26%)
TM helix 3 73..106 CDD:341315 7/33 (21%)
TM helix 4 119..138 CDD:341315 6/27 (22%)
TM helix 5 164..188 CDD:341315 3/24 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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