DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and H09F14.1

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001256232.1 Gene:H09F14.1 / 186709 WormBaseID:WBGene00010375 Length:401 Species:Caenorhabditis elegans


Alignment Length:324 Identity:75/324 - (23%)
Similarity:143/324 - (44%) Gaps:75/324 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 IIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSD------ILFVIFCVPFTATDYVLPEWP 141
            :|...||.||.:.::.:..::..|...|:.:|.|.::|      ||.:.|.|.:.|.:|      
 Worm    17 LIVIFGLSGNVISLVTIFHSRLRRVNANIYLIVLTLADSIFLTGILLICFKVDWIAYEY------ 75

  Fly   142 FGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTA 206
                 |..::|:::...:.|.::...::.:|:||:.||::.|.......|  .:|..|:     .
 Worm    76 -----CVGLEYVLMTASYISSWSTAALTIERYLAIAHPLSHMKYGHVDRA--KVMLYWV-----P 128

  Fly   207 IPVALSHSVRIYQYHGNAGTACVFSTE-----------EEIWSLVGFQVSFFLSSYVAPLTLICF 260
            ||..|    :::|:         ||.|           |..:.::...|...| .||.|..:|..
 Worm   129 IPFVL----QLFQF---------FSLEPATEERKCALKEANYQIIAQAVDTVL-CYVVPCGIIVV 179

  Fly   261 LYMGMLARLWKSAPGCKPSAESRKGKRR-----------VTRMVVVVVLAFAICWLPIHVILVLK 314
            |.:.:..::.||....  .||::|...|           .||::.|:.|.|.:...|.:||::::
 Worm   180 LNILVALQVQKSQEHF--MAETKKSNSRRTGGSSSSSGTWTRILWVMPLVFVVLNTPFYVIMMIE 242

  Fly   315 AL--NLYGG-------SHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRK----AFRKVVWCG 365
            .:  .:|..       |.|.|.:...:|.:.|.|:.|:.::|||.|.||||    |:::::..|
 Worm   243 IVFQIIYQSPPSGDTRSELFVTVYNTAHYMYYMNTAIDVLVYAFSSANFRKTAVIAWKRILCPG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 73/315 (23%)
TM helix 1 76..102 CDD:320224 5/18 (28%)
TM helix 2 109..135 CDD:320224 9/31 (29%)
TM helix 3 147..177 CDD:320224 6/29 (21%)
TM helix 4 189..209 CDD:320224 4/19 (21%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 10/40 (25%)
TM helix 7 326..351 CDD:320224 8/24 (33%)
H09F14.1NP_001256232.1 7tm_GPCRs 10..295 CDD:475119 73/311 (23%)
TM helix 1 11..35 CDD:410628 5/17 (29%)
TM helix 2 44..65 CDD:410628 6/20 (30%)
TM helix 3 77..99 CDD:410628 2/21 (10%)
TM helix 5 159..182 CDD:410628 7/23 (30%)
TM helix 6 218..240 CDD:410628 8/21 (38%)
TM helix 7 263..288 CDD:410628 8/24 (33%)

Return to query results.
Submit another query.