DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-41

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_504021.1 Gene:srx-41 / 186592 WormBaseID:WBGene00005932 Length:328 Species:Caenorhabditis elegans


Alignment Length:334 Identity:68/334 - (20%)
Similarity:133/334 - (39%) Gaps:56/334 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LERIVSTIVPVFF-----GIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDI----LFV 124
            :|..||:....||     ..|...||:||..|.:.....:.::::...|..:.:.::.    :|:
 Worm    12 VEPTVSSQTQRFFVTLAIFTISLTGLIGNLSVFMFATTLKTLQNSFGRLSASQSFAEAVLCGVFL 76

  Fly   125 IFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCH--CSVYTLVLMSFDRFLAVVHPVTSMSLRT 187
            .|..|....|  :|  .|..|..:.  .:|::.|:  | :::.:.::|:|..|:..|:...|...
 Worm    77 FFYCPMVLLD--IP--TFKRVSAQV--GLILLFCYDVC-IFSHLFIAFNRLCAISFPIEYNSFFN 134

  Fly   188 ERNATLAIMCAWITIVTTAIPVALSHSVRI------YQYHGNAGTACVFSTEEEIWSLVGFQVSF 246
            .||..:.|..|:.....|:|.:.|:::..:      :.:..|....|         .::.|.|.|
 Worm   135 MRNTRILIALAYAIPCFTSIYMHLANNCNLPYVDFGWYFGVNTSADC---------DVIRFYVDF 190

  Fly   247 FLSSYVAPLTLICFLYMGMLARLWKSAPGCK----PSAESRKGKRRVTRMVVVVVLAFAICWLPI 307
            .....|  :.||..:.:|.:..:..:|||.|    ..|:|:|.::|....|...::..|:....:
 Worm   191 CKDFGV--VALIAIVDVGTIVMIKVTAPGMKLLSANCAQSQKKRQREITFVKQALIQGAVFATEL 253

  Fly   308 HVILVLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMT 372
            ....::.     |.....|.|.:.:.|.......|:|::...|:..||..            ||.
 Worm   254 VFFFIIS-----GMQSQPVAIFLCTTVAWSLVHTIDPLVLILLNREFRNM------------LMK 301

  Fly   373 NQQVTKTTR 381
            |....:|||
 Worm   302 NPLTKRTTR 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 31/168 (18%)
7tm_1 91..347 CDD:278431 51/271 (19%)
srx-41NP_504021.1 TM helix 1 26..50 CDD:341315 6/23 (26%)
7TM_GPCR_Srx 30..292 CDD:370981 54/284 (19%)
TM helix 2 57..83 CDD:341315 4/25 (16%)
TM helix 3 95..124 CDD:341315 6/31 (19%)
TM helix 4 137..166 CDD:341315 6/28 (21%)
TM helix 5 191..211 CDD:341315 4/21 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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