DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-85

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_505930.2 Gene:srx-85 / 185457 WormBaseID:WBGene00005976 Length:325 Species:Caenorhabditis elegans


Alignment Length:291 Identity:55/291 - (18%)
Similarity:102/291 - (35%) Gaps:77/291 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SNSSGNNYAFTSEHTDHSDHNANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVV 99
            ||||..:......:.|.|                     |.|..:...:.|..|::.|.|:|.:.
 Worm     3 SNSSNEDVPIIYNYQDPS---------------------SFIASILMIVNGSFGVVCNSLIIYIF 46

  Fly   100 VANQQMRSTTNLLIINLAVSDILFVI-----FCVPFTAT-----DYVLPEWPFGNVWCKFVQYMI 154
            ....:.|:..|::.:..|..::..:|     ..||.|.:     ...|..|.   :......|| 
 Worm    47 CKETKERTAFNVICMVRAFVNLYILITNHLGLFVPMTLSGKAIVSKTLETWA---ISMSNSLYM- 107

  Fly   155 VVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNAT--LAIMCAW-------ITIVTTAIPVA 210
                 .:.|..|::|.:||:::..|:..:.|...:...  |.:|.|:       .||..|||...
 Worm   108 -----ANEYLTVVISVNRFISLFFPLYYVKLCGMKPTVVILIVMYAYRIGAVAKETISFTAINCY 167

  Fly   211 LSHSVRIY--------QYHGNAGTACVFSTEEEIWSLVGFQVSFFLSSYVAPLTLICFLYMGMLA 267
            :.:.|...        |..||:|                  :..|::...|.:::|.......:.
 Worm   168 ILYYVEYLSWLPDFSPQCSGNSG------------------ILLFMAVNFAIVSVINVATFAKIF 214

  Fly   268 RLWKSAPGCKPSAESRKGKRRVTRMVVVVVL 298
            :.:|:..  |...||||..::...:.:..||
 Worm   215 KFYKNQN--KTDKESRKRIKKNIYLFIQTVL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 36/183 (20%)
7tm_1 91..347 CDD:278431 45/235 (19%)
srx-85NP_505930.2 TM helix 1 23..49 CDD:341315 6/25 (24%)
7TM_GPCR_Srx 29..291 CDD:370981 47/244 (19%)
TM helix 2 56..84 CDD:341315 5/27 (19%)
TM helix 3 95..125 CDD:341315 8/38 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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