DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-134

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_506434.2 Gene:srx-134 / 184254 WormBaseID:WBGene00006025 Length:307 Species:Caenorhabditis elegans


Alignment Length:288 Identity:58/288 - (20%)
Similarity:122/288 - (42%) Gaps:51/288 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNL--LIINLAVSDIL----FVIFCVPFT 131
            ::.::|:..|.||.  :|  .|:::|.....:..:.||.  |.:..|:|:.:    |..:.|||:
 Worm     4 LNILIPLLLGSIGV--IL--NLILIVKFMKIKKSAVTNFTKLCLCKAISNFVMSASFPFWIVPFS 64

  Fly   132 ATDYVLPEWP--FGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLA 194
            ..::.:...|  ...:..:||.   :.|.:...:.|:.||.:||:|:..|.:::|    :.....
 Worm    65 MLEFKIQNIPRTLNVIVSEFVG---IFTYYFGPFILICMSINRFIAIYFPFSTIS----KKPFFT 122

  Fly   195 IMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVS-FFLSSYVAPLTLI 258
            ....:|:|:..:.||.:......|..:....|  :||:|.  :...|..:: ||:.|.|....:.
 Worm   123 NFGIFISILLASSPVFVPKIFSCYIIYDPETT--IFSSEN--YDRCGEAMNQFFVISIVTLALIS 183

  Fly   259 CFLYMGMLARLWK-SAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYGGS 322
            ..:.:.:.|:|.| ...|...:.:|::.|:..|..:..|:..|         :..:..:|||   
 Worm   184 NLINLVIFAKLMKDKMSGVSEAQKSKRRKKWQTMYIQSVIQDF---------LQAVDIINLY--- 236

  Fly   323 HLSVIIQIISHVVAYTNSCINPILYAFL 350
                          ||:...:..|:.|:
 Worm   237 --------------YTSGLFDDPLWVFV 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 35/164 (21%)
7tm_1 91..347 CDD:278431 51/265 (19%)
srx-134NP_506434.2 7TM_GPCR_Srx 11..271 CDD:370981 57/281 (20%)
TM helix 2 36..69 CDD:341315 9/32 (28%)
TM helix 3 82..109 CDD:341315 9/29 (31%)
TM helix 4 128..150 CDD:341315 5/21 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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