DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and srx-50

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001367449.1 Gene:srx-50 / 177478 WormBaseID:WBGene00005941 Length:313 Species:Caenorhabditis elegans


Alignment Length:350 Identity:69/350 - (19%)
Similarity:139/350 - (39%) Gaps:74/350 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VALERIVSTIV-PVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILF-VIFCVP 129
            ||.|||...:| |     |...|::.|..|.|::.....::::...|..:.::.|.:. .:|...
 Worm     2 VADERIAGMVVFP-----IALIGVMANWTVALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFI 61

  Fly   130 FTATDYVLPE------WPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTE 188
            |:...:...|      ..||::        :::....|.|:.:.:|.:||.::|.|:...::.:.
 Worm    62 FSPMCFFSVEIMKTYSSAFGHI--------LLIAYDISTYSHLCISLNRFCSIVAPIKYDTIFSM 118

  Fly   189 RNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEEEIW-----------SLVGF 242
            .|....||.:|      |..|..|..:.|||       .|.|...|:.|           ::|.:
 Worm   119 SNTKKLIMFSW------ACAVLPSFYLYIYQ-------DCRFYYIEDFWVFTFSTTPVCNTIVWY 170

  Fly   243 QVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKR--RVTRMVVVVVLAFA-ICW 304
            ......:|.|..:.:|..:.:..: |.:|:... |.:::|.:.||  .:..:....:.||. :|.
 Worm   171 ADFLKYNSIVISIVIIDVITVSKV-RSYKAGLS-KTTSQSHEKKRSAEMNFLKQACLQAFVFVCE 233

  Fly   305 LPIHVILVLKALNLYGGSH--LSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVW---- 363
            |..:.::..:.    .||.  |...:..::.|      |:: :|...::.:|.|.|.:.::    
 Worm   234 LITYFLITPRV----DGSERWLRFFLSTVAWV------CVH-MLDGVITLSFNKEFTQTIFRGIK 287

  Fly   364 -------CGSPPPLMTNQQVTKTTR 381
                   .|......:|...|.|||
 Worm   288 IKDLSGHIGHHQENSSNAGATHTTR 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 33/174 (19%)
7tm_1 91..347 CDD:278431 50/278 (18%)
srx-50NP_001367449.1 7TM_GPCR_Srx 13..275 CDD:402100 54/300 (18%)
TM helix 2 41..62 CDD:410626 3/20 (15%)
TM helix 3 78..100 CDD:410626 4/29 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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