DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and tkr-3

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001343603.1 Gene:tkr-3 / 177285 WormBaseID:WBGene00006428 Length:400 Species:Caenorhabditis elegans


Alignment Length:316 Identity:76/316 - (24%)
Similarity:147/316 - (46%) Gaps:42/316 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFG 143
            :.:.||.|..::||.||:.:.:...::||.|...|:||..:|:...||.:||.....:..||...
 Worm    51 MLYAIIAFMAVVGNLLVLYITLFRLRVRSITTYFILNLGFADLFTGIFAIPFKFQAALFQEWFLP 115

  Fly   144 NVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSM-----SLRTERNATLAIMCAWITIV 203
            ...|:.|.|:..|....||:|||       .:.||...:|     |..:.|:|...::..||..|
 Worm   116 RSLCRIVPYVETVALTVSVFTLV-------TSAVHEFRTMFFSKCSQMSPRSAKRCVLLIWIMAV 173

  Fly   204 TTAIPVALSHSVRIYQYHGNAGTA---CVFSTEEEIWSLVGFQVSFFLSSYVAPLTLICFLYMGM 265
            ..::|..|.|:.  |::..:..|:   |:....:..|... :.|...:..|..|:.::...|..:
 Worm   174 LVSLPHGLFHNT--YEFPDDNNTSIVQCLPVYPDAGWWKT-YNVYLVIIQYFVPMIILDTAYTMI 235

  Fly   266 LARLWKSAPGCKPSAESRKGKRRVT---------------RMVVVVVLAFAICWLPIHVILVLKA 315
            ..::|..:.......|::...::::               |.:::||..|::||.|:...|:|..
 Worm   236 AVKIWSLSQSRVELDETKMATQKISVVSMVSPNTQLSQLMRTLIIVVACFSLCWFPLETYLLLNE 300

  Fly   316 L--NLYGGSHLSVIIQIISHVVAYTNSCINPILYAF----LSDNFRKAFRKV--VW 363
            |  .:.|..:::::. ..||.:|.:|||:|||:|..    .::.:|:.||::  :|
 Worm   301 LKPEINGWKYINLVF-FFSHWLAMSNSCLNPIIYGLYNTKYNEEYRRLFRQIGCIW 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 73/307 (24%)
TM helix 1 76..102 CDD:320224 7/22 (32%)
TM helix 2 109..135 CDD:320224 9/25 (36%)
TM helix 3 147..177 CDD:320224 9/29 (31%)
TM helix 4 189..209 CDD:320224 5/19 (26%)
TM helix 5 239..268 CDD:320224 4/28 (14%)
TM helix 6 284..314 CDD:320224 8/44 (18%)
TM helix 7 326..351 CDD:320224 10/28 (36%)
tkr-3NP_001343603.1 7tm_GPCRs 47..344 CDD:475119 72/303 (24%)
TM helix 1 49..73 CDD:320515 7/21 (33%)
TM helix 2 82..104 CDD:320515 8/21 (38%)
TM helix 3 120..142 CDD:320515 8/28 (29%)
TM helix 4 163..179 CDD:320515 3/15 (20%)
TM helix 5 210..233 CDD:320515 3/23 (13%)
TM helix 6 275..297 CDD:320515 7/21 (33%)
TM helix 7 312..337 CDD:320515 10/25 (40%)

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