DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and ckr-2

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001367973.1 Gene:ckr-2 / 175341 WormBaseID:WBGene00021439 Length:603 Species:Caenorhabditis elegans


Alignment Length:451 Identity:96/451 - (21%)
Similarity:153/451 - (33%) Gaps:173/451 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPE 139
            ||...|| :|....::||.:|::|::..:.|||.||:.::|||.||::..:.|:|.|....|:..
 Worm    62 TIAVTFF-MIFLLSVVGNSVVLIVIIKQRAMRSITNIYLMNLAASDMMLSVVCMPPTLVSMVMNC 125

  Fly   140 WPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVT 204
            |.|||..||.:.|:..|....|.|||.:::|:|:.|:..|:.|...:|..:|...|...|:..:.
 Worm   126 WMFGNYMCKILAYLQPVVVTASAYTLAVIAFERYFAICKPLHSRIWQTRSHAYAMITLVWVIAIA 190

  Fly   205 TAIPVALSHSVRIYQ-------------YH-----------------------GNAGTACVFSTE 233
            ..|.:...:..:.|.             ||                       ||..|:.....:
 Worm   191 ANILMLFMYEQQTYSSNGYTCAPIHPPIYHFAYQVYMTVVLLVIPLVVMAGLYGNVITSLKSGIK 255

  Fly   234 EEIWS------------------------------LVGFQVSFFLSSYVAPLTLICFLYMGMLAR 268
            .||.|                              |||.......:|.:|..|..|.......:.
 Worm   256 LEIASVDPPLATATTTGAKNLGSHSDSAHLLLNNVLVGSSQLARATSCIALNTFSCNNTTNPFST 320

  Fly   269 LWKSAP------------------------------GCK-------------------------- 277
            |....|                              .|:                          
 Worm   321 LTPPPPIQQKNRSKPQLLQLPGKIDNFEEFRLQCLSDCRSDGVLFPPPAIVASMTDEQKLSFWNK 385

  Fly   278 --------------------------------PS------AESRKGKRRVTRMVVVVVLAFAICW 304
                                            ||      .:|...|:||.:|::|||:.|..||
 Worm   386 LSNKLTFSQQDKTVQHPNFGHRKSDTSICLENPSLRSTHTQKSAMAKQRVIKMLIVVVIIFFCCW 450

  Fly   305 LPIHVILVL-------KALNL-YGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKA 357
            .|.::..:|       ::||| ...|.::..|.:::    |.:||.|||.|.||:..||.|
 Worm   451 TPSYIWWLLLIAGDSFQSLNLSVWNSDINTFITLLT----YISSCTNPITYCFLNKKFRNA 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 96/451 (21%)
TM helix 1 76..102 CDD:320224 8/25 (32%)
TM helix 2 109..135 CDD:320224 10/25 (40%)
TM helix 3 147..177 CDD:320224 11/29 (38%)
TM helix 4 189..209 CDD:320224 4/19 (21%)
TM helix 5 239..268 CDD:320224 7/28 (25%)
TM helix 6 284..314 CDD:320224 12/36 (33%)
TM helix 7 326..351 CDD:320224 9/24 (38%)
ckr-2NP_001367973.1 7tmA_CCKR-like 61..508 CDD:320124 96/451 (21%)
TM helix 1 62..88 CDD:320124 9/26 (35%)
TM helix 2 95..121 CDD:320124 10/25 (40%)
TM helix 3 133..163 CDD:320124 11/29 (38%)
TM helix 4 177..195 CDD:320124 4/17 (24%)
TM helix 5 220..245 CDD:320124 1/24 (4%)
TM helix 6 430..460 CDD:320124 11/29 (38%)
TM helix 7 476..501 CDD:320124 10/28 (36%)

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