DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and Ackr3

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001258536.1 Gene:Ackr3 / 12778 MGIID:109562 Length:362 Species:Mus musculus


Alignment Length:352 Identity:85/352 - (24%)
Similarity:163/352 - (46%) Gaps:62/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NYAFTSEHTD-HSDHNANDSMEYDA--------ESVALERIVSTIVPVFFGIIGFAGLLGNGLVI 96
            :||....::| :...|::|.:..|.        ::|.|..:  :.:.:|..:|   |::.|.:|:
Mouse     7 DYAEPGNYSDINWPCNSSDCIVVDTVQCPTMPNKNVLLYTL--SFIYIFIFVI---GMIANSVVV 66

  Fly    97 LVVVANQQMRST---TNLLIINLAVSDILFVIFCVPFTATDYVL-PEWPFGNVWCKFVQYMIVVT 157
            .|   |.|.::|   |:..|:|||::| |:|:..:|......|. .:||.|.:.||....:..:.
Mouse    67 WV---NIQAKTTGYDTHCYILNLAIAD-LWVVITIPVWVVSLVQHNQWPMGELTCKITHLIFSIN 127

  Fly   158 CHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHG 222
            ...|::.|..||.||:|::.:...:.|.:.:....:..:..|:.....::|.  ::.::......
Mouse   128 LFGSIFFLACMSVDRYLSITYFTGTSSYKKKMVRRVVCILVWLLAFFVSLPD--TYYLKTVTSAS 190

  Fly   223 NAGTAC-VFSTEEEI--WSLVGFQVSFFLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRK 284
            |..|.| .|..|..|  | |:|.::...:..:..|.|:|...|. :|||. .||.|.:....|||
Mouse   191 NNETYCRSFYPEHSIKEW-LIGMELVSVILGFAVPFTIIAIFYF-LLARA-MSASGDQEKHSSRK 252

  Fly   285 GKRRVTRMVVVVVLAFAICWLPIHVILVLKALN--------------LYGGSHLSVIIQIISHVV 335
                   ::...|:.|.:||||.|.:::|...:              |:...|::..:.::    
Mouse   253 -------IIFSYVVVFLVCWLPYHFVVLLDIFSILHYIPFTCQLENVLFTALHVTQCLSLV---- 306

  Fly   336 AYTNSCINPILYAFLSDNFR----KAF 358
               :.|:||:||:|::.|:|    |||
Mouse   307 ---HCCVNPVLYSFINRNYRYELMKAF 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 40/163 (25%)
7tm_1 91..347 CDD:278431 66/276 (24%)
Ackr3NP_001258536.1 7tmA_ACKR3_CXCR7 45..326 CDD:320118 74/308 (24%)
TM helix 1 47..71 CDD:320118 7/31 (23%)
TM helix 2 80..101 CDD:320118 8/21 (38%)
TM helix 3 118..140 CDD:320118 4/21 (19%)
TM helix 4 163..179 CDD:320118 1/15 (7%)
TM helix 5 210..233 CDD:320118 4/22 (18%)
TM helix 6 251..273 CDD:320118 9/28 (32%)
TM helix 7 294..319 CDD:320118 7/31 (23%)
C-terminal cytoplasmic tail. /evidence=ECO:0000250 324..362 3/7 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837215
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.