DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and nmur2

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_002940961.1 Gene:nmur2 / 100498226 XenbaseID:XB-GENE-6046084 Length:397 Species:Xenopus tropicalis


Alignment Length:335 Identity:96/335 - (28%)
Similarity:161/335 - (48%) Gaps:40/335 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NDSMEYDAESVALERI-VSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSD 120
            |.:.||.|.....:|. :|..:.:.:..|...|::||.||.||::.:..||:.||..:.:|||||
 Frog    26 NSTEEYLAYLCGPKRSRLSLPMTLVYATIFLIGVIGNTLVCLVILKHHNMRTPTNYYLFSLAVSD 90

  Fly   121 ILFVIFCVPFTATDYVLPEWP--FGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSM 183
            :|.::..:|....: :...:|  ||...|.|...:....|..|:.::..:|.:|::|::||..:.
 Frog    91 LLVLLLGMPLEVYE-MWSNYPFLFGAWGCYFKTVLFETVCFASILSVTTVSVERYVAIIHPFQAK 154

  Fly   184 SLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNA-----GTACVFSTEEEIWSLVGFQ 243
            ...|...|...::..||..:..:||...:|.: :.||..|.     ...|.......|::.: .|
 Frog   155 LKSTRSRALKILVTLWIFSILFSIPNTSTHGI-LLQYFPNGSLIPDSATCTVVQPLWIYNCI-IQ 217

  Fly   244 VSFFLSSYVAPLTLICFLY--MGMLARLWKSAPGCKPSAE-SRKGKRRVTRMVVVVVLAFAICWL 305
            |:..| .|:.|:.:|..||  ||:..|...|....|.|.. .|..::.:|:|:.|:|:.|.|||.
 Frog   218 VTSLL-FYILPMGVISVLYCLMGIKLRGDHSLEADKMSVNVQRPSRKSITKMLFVLVMVFGICWA 281

  Fly   306 PIHV-------IL-----VLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAF 358
            |.||       :|     :..|.||   :|      ::|.|..|.:|.:||::|..||..||.||
 Frog   282 PFHVDRLFFSFVLDWTEPLANAFNL---TH------VVSGVFFYLSSAVNPLIYNLLSRRFRSAF 337

  Fly   359 RKVVWCGSPP 368
            :.|:    ||
 Frog   338 QNVL----PP 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 43/163 (26%)
7tm_1 91..347 CDD:278431 78/277 (28%)
nmur2XP_002940961.1 7tmA_NMU-R2 45..337 CDD:320479 85/304 (28%)
TM helix 1 45..72 CDD:320479 8/26 (31%)
TM helix 2 79..105 CDD:320479 9/26 (35%)
TM helix 3 118..148 CDD:320479 7/29 (24%)
TM helix 4 160..182 CDD:320479 5/21 (24%)
TM helix 5 212..241 CDD:320479 10/30 (33%)
TM helix 6 260..290 CDD:320479 11/29 (38%)
TM helix 7 305..330 CDD:320479 10/33 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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