DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and ghsr

DIOPT Version :10

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_002931618.1 Gene:ghsr / 100497774 XenbaseID:XB-GENE-484475 Length:359 Species:Xenopus tropicalis


Alignment Length:333 Identity:90/333 - (27%)
Similarity:157/333 - (47%) Gaps:36/333 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 VPVFFGI------IGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDY 135
            |||..||      :...|:.||.:.:|||...:.||:||||.:.::|.||:| :..|:|...  |
 Frog    33 VPVLTGITVTCILLFIIGISGNVMTMLVVSKYKDMRTTTNLYLSSMAFSDLL-IFLCMPLDL--Y 94

  Fly   136 VLPE---WPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMC 197
            .|.:   |.||:..||..|::.....:.::..:..:|.:|:.|:..|:.:..:.|:....|.|..
 Frog    95 RLWQYRPWNFGSSLCKLFQFVSECCTYSTILNITALSVERYFAICFPLKAKVVITKGRVKLVISV 159

  Fly   198 AWITIVTTAIP----VALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSFFLSSYVAPLTLI 258
            .|.....:|.|    |.:.|.........|...|..::.:..:.:::.:..|.|   :..|:..:
 Frog   160 LWAVSFVSAGPIFVLVGVEHENGTNPLDTNECKATEYAIKSGLLTIMVWTSSIF---FFLPVFCL 221

  Fly   259 CFLYMGMLARLW---KSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALNLYG 320
            ..||..:..:||   :...|...|...:..|:.| :|:.|||.||.:||||.||...|.:.:...
 Frog   222 TVLYTLIGRKLWRRKRETIGPHTSIRDKHNKQTV-KMLAVVVFAFILCWLPFHVARYLFSKSFEA 285

  Fly   321 GS-HLSVIIQ---IISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQQVTKTTR 381
            || .:::|.|   ::|.|:.|.::.||||||..:|..:|.|..:         |...:||::...
 Frog   286 GSLEIALISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAACR---------LFRLKQVSRKAT 341

  Fly   382 TATGNGTS 389
            ..|.:.:|
 Frog   342 YTTNDESS 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tmA_AstA_R_insect 75..358 CDD:320224 84/300 (28%)
TM helix 1 76..102 CDD:320224 11/30 (37%)
TM helix 2 109..135 CDD:320224 9/25 (36%)
TM helix 3 147..177 CDD:320224 6/29 (21%)
TM helix 4 189..209 CDD:320224 5/23 (22%)
TM helix 5 239..268 CDD:320224 5/28 (18%)
TM helix 6 284..314 CDD:320224 14/29 (48%)
TM helix 7 326..351 CDD:320224 11/27 (41%)
ghsrXP_002931618.1 7tmA_GHSR 37..327 CDD:320259 81/296 (27%)
TM helix 1 37..64 CDD:320259 8/26 (31%)
TM helix 2 71..96 CDD:320259 10/27 (37%)
TM helix 3 109..139 CDD:320259 6/29 (21%)
TM helix 4 151..173 CDD:320259 5/21 (24%)
TM helix 5 202..231 CDD:320259 5/31 (16%)
TM helix 6 249..279 CDD:320259 14/30 (47%)
TM helix 7 295..320 CDD:320259 10/24 (42%)

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