DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and oprm1

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_002933909.1 Gene:oprm1 / 100487937 XenbaseID:XB-GENE-1011391 Length:388 Species:Xenopus tropicalis


Alignment Length:342 Identity:117/342 - (34%)
Similarity:185/342 - (54%) Gaps:26/342 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVS 119
            |.:::...|::|:    |::.|:...:.:|...||.||.||:.|:|...:|::.||:.|.|||::
 Frog    54 NQSETFPEDSDSI----IIAIIITALYSMICVMGLFGNVLVMYVIVRYTKMKTATNIYIFNLALA 114

  Fly   120 DILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMS 184
            |.| ....:||.:.:|::..|||||:.||.|..:.......|::||..||.||::||.|||.::.
 Frog   115 DAL-ATSTLPFQSVNYLMGTWPFGNIVCKIVISIDYYNMFTSIFTLTTMSVDRYIAVCHPVKALD 178

  Fly   185 LRTERNATLAIMCAWITIVTTAIPV---ALSHSVRIYQYHGNAGTACVFSTEEEIWSLVGFQVSF 246
            .||.|||.:..:|.||......:||   |.:.|.|     |:...|.:|......|..: .::..
 Frog   179 FRTPRNAKIVNVCNWILSSAIGLPVMFMATTKSER-----GSTDCALLFPHPSWYWDNL-LKICV 237

  Fly   247 FLSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVIL 311
            |:.:::.|:.:|...|..|:.|| ||......|.|..:..||:||||:|||..|.:||.|||:.:
 Frog   238 FIFAFIMPVLIITVCYGMMILRL-KSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYV 301

  Fly   312 VLKALNLYGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQQV 376
            ::|||.....|....:...:...:.|||||:||:|||||.:||::.||:  :|  .|...|.:|.
 Frog   302 IIKALINIPPSLFQTVTWHVCIALGYTNSCLNPVLYAFLDENFKRCFRE--FC--IPTSSTIEQQ 362

  Fly   377 TKT-------TRTATGN 386
            ..|       .|.:|.|
 Frog   363 NSTRMRHNTRDRASTAN 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 58/159 (36%)
7tm_1 91..347 CDD:278431 92/258 (36%)
oprm1XP_002933909.1 7tmA_Mu_opioid_R 73..348 CDD:320218 102/282 (36%)
TM helix 1 73..97 CDD:320218 9/23 (39%)
TM helix 2 104..130 CDD:320218 10/26 (38%)
TM helix 3 141..171 CDD:320218 11/29 (38%)
TM helix 4 183..205 CDD:320218 8/21 (38%)
TM helix 5 230..259 CDD:320218 5/29 (17%)
TM helix 6 274..304 CDD:320218 15/29 (52%)
TM helix 7 316..341 CDD:320218 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.