DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R1 and sstr5

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_002932329.2 Gene:sstr5 / 100486456 XenbaseID:XB-GENE-949452 Length:369 Species:Xenopus tropicalis


Alignment Length:343 Identity:117/343 - (34%)
Similarity:184/343 - (53%) Gaps:37/343 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 NANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLLGNGLVILVVVANQQMRSTTNLLIINLAVS 119
            ||:|:......||:  .:.|.|:|:.:.::...||.||.|||.||:...:|::.||:.|:||||:
 Frog    26 NASDNKTVVDPSVS--GMSSFIIPLIYLLVCVIGLSGNTLVIYVVLRYAKMKTVTNIYILNLAVA 88

  Fly   120 DILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIVVTCHCSVYTLVLMSFDRFLAVVHPVTSMS 184
            |:||:: .:||.||...:..||||...|:.|..:..|....|::.|.:||.||:||||||:.|..
 Frog    89 DVLFML-GLPFLATQNAISYWPFGTFLCRLVMTVDGVNQFTSIFCLTVMSIDRYLAVVHPIKSTK 152

  Fly   185 LRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQYHGNAGTACVFSTEE--EIWSLVGFQVSFF 247
            .|..|.|.|.....|.......:||.:...|: ..||     .|..|..:  .:|: ..|.:...
 Frog   153 WRRPRVAKLISATVWTLSFLVTLPVIIFSEVQ-PDYH-----TCNISWPDPVSVWA-AAFIIYTS 210

  Fly   248 LSSYVAPLTLICFLYMGMLARLWKSAPGCKPSAESRKGKRRVTRMVVVVVLAFAICWLPIHVILV 312
            :..:..||::||..|:.::.:: ||:.....|...|:.:|:||||||::|..|..||||.:   :
 Frog   211 VLGFFGPLSVICLCYLLIVIKV-KSSGLRVGSTRRRRSERKVTRMVVIIVAVFVFCWLPFY---I 271

  Fly   313 LKALNL---------YGGSHLSVIIQIISHVVAYTNSCINPILYAFLSDNFRKAFRKVVWC---- 364
            |..:||         :.|.:..|:      |::|.|||.|||||.||||||:::|:||: |    
 Frog   272 LNIVNLSFFVPEEPAFAGVYFFVV------VLSYANSCANPILYGFLSDNFKQSFQKVL-CLRKS 329

  Fly   365 -GSPPPLMTNQQVTKTTR 381
             |.....:|..:..|::|
 Frog   330 NGIKDADLTENRQEKSSR 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 57/158 (36%)
7tm_1 91..347 CDD:278431 91/266 (34%)
sstr5XP_002932329.2 7tmA_SSTR5 44..320 CDD:320640 103/293 (35%)
TM helix 1 45..71 CDD:320640 11/25 (44%)
TM helix 2 78..104 CDD:320640 14/26 (54%)
TM helix 3 115..145 CDD:320640 11/29 (38%)
TM helix 4 157..179 CDD:320640 6/21 (29%)
TM helix 5 202..231 CDD:320640 6/29 (21%)
TM helix 6 246..276 CDD:320640 14/32 (44%)
TM helix 7 288..313 CDD:320640 13/30 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.