DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R1 and kiss1r

DIOPT Version :9

Sequence 1:NP_524700.1 Gene:AstA-R1 / 44126 FlyBaseID:FBgn0266429 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001163985.1 Gene:kiss1r / 100316929 XenbaseID:XB-GENE-990075 Length:366 Species:Xenopus tropicalis


Alignment Length:383 Identity:129/383 - (33%)
Similarity:195/383 - (50%) Gaps:43/383 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 NGSIISVSNS--SGNNYAFTSEHTDHSDHNANDSMEYDAESVALERIVSTIVPVFFGIIGFAGLL 90
            |.|:.|.::|  .|..|..|         |.:|..:|.......:.:.:.:||:||.::...||.
 Frog     3 NESLFSFNDSCLGGMVYLCT---------NMSDLEKYGDPPRPPQLVDAWLVPLFFAMLMLVGLT 58

  Fly    91 GNGLVILVVVANQQMRSTTNLLIINLAVSDILFVIFCVPFTATDYVLPEWPFGNVWCKFVQYMIV 155
            ||.|||.|:..::|||:.||..|.|||.:||:|::.||||||..|.||.|.||...||||.|:..
 Frog    59 GNSLVIYVISKHKQMRTVTNFYIANLAATDIIFLVSCVPFTAALYPLPGWIFGEFMCKFVNYIQQ 123

  Fly   156 VTCHCSVYTLVLMSFDRFLAVVHPVTSMSLRTERNATLAIMCAWITIVTTAIPVALSHSVRIYQY 220
            |:...:..||..||.||:...|:|:.|:..||.|.|....:..||.....:|||.:.:.: |..|
 Frog   124 VSVQATCVTLTAMSVDRWYVTVYPLQSLRQRTPRVAAAVSVGIWIGSFIVSIPVPIYNQL-IEGY 187

  Fly   221 HGNAGTACVFSTEEEIWSLVGFQVSF----FLSSYVAPLTLICFLYMGMLARLWKSAPGCKP--- 278
            .......|     .|.:..|..:.:|    ||..|:.||..||..|..|:.::.:  |..:|   
 Frog   188 WFGPQIYC-----SESFPSVSHEKAFILYNFLVVYLLPLITICICYSAMVYQMGR--PSVEPVDN 245

  Fly   279 -------SAESRKGKRRVTRMVVVVVLAFAICWLPIHVILVLKALN-LYGGSHLSVIIQIISHVV 335
                   :..|...:.:::|||.|:||.|.|||.||.:.::.:|.: .:...:.:..::|.::.:
 Frog   246 SYQVQLLAERSELMRTKISRMVAVIVLLFTICWGPIQLYILFQAFSPSFKRDYYTYKVKIWANCM 310

  Fly   336 AYTNSCINPILYAFLSDNFRKAFRKVVWCGSPPPLMTNQQVTKTTRTATGNGTSNIEM 393
            :||||.||||:|||:..||||||.||.      |.:..|:|..   |...|..:|.||
 Frog   311 SYTNSSINPIVYAFMGANFRKAFNKVF------PFLFKQRVGS---TGVANANANTEM 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R1NP_524700.1 7tm_4 83..>240 CDD:304433 60/156 (38%)
7tm_1 91..347 CDD:278431 94/270 (35%)
kiss1rNP_001163985.1 7tmA_KiSS1R 43..333 CDD:320223 107/297 (36%)
TM helix 1 44..70 CDD:320223 12/25 (48%)
TM helix 2 77..103 CDD:320223 15/25 (60%)
TM helix 3 115..145 CDD:320223 12/29 (41%)
TM helix 4 157..177 CDD:320223 5/19 (26%)
TM helix 5 205..234 CDD:320223 10/28 (36%)
TM helix 6 258..288 CDD:320223 12/29 (41%)
TM helix 7 301..326 CDD:320223 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14084
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3950
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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