DRSC/TRiP Functional Genomics Resources

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Protein Alignment vih and ube2r2

DIOPT Version :9

Sequence 1:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001072702.1 Gene:ube2r2 / 780159 XenbaseID:XB-GENE-994678 Length:238 Species:Xenopus tropicalis


Alignment Length:156 Identity:56/156 - (35%)
Similarity:81/156 - (51%) Gaps:24/156 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KRLHKELMNLMMANERGISAF----PDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAA 95
            |.|..||.:|   .|..:..|    .|..:::.|...|.||.||:|.|..::..:.||..|||:.
 Frog    11 KALMLELKSL---QEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSP 72

  Fly    96 PVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNE 147
            |..:|||..:|||:...|.:|:.||             .::|:...:|||||||:.|||.|||..
 Frog    73 PTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTF 137

  Fly   148 SPLNAQAAMM---WNDQK-EYKKYLD 169
            ||.|..|::|   |.|.| :.|:|.:
 Frog   138 SPANVDASVMFRKWRDSKGKDKEYAE 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vihNP_648582.1 COG5078 31..166 CDD:227410 54/151 (36%)
UQ_con 36..172 CDD:278603 55/155 (35%)
ube2r2NP_001072702.1 UBCc 11..169 CDD:238117 56/156 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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