DRSC/TRiP Functional Genomics Resources

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Protein Alignment vih and UBE2L3

DIOPT Version :9

Sequence 1:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001243284.1 Gene:UBE2L3 / 7332 HGNCID:12488 Length:212 Species:Homo sapiens


Alignment Length:148 Identity:44/148 - (29%)
Similarity:75/148 - (50%) Gaps:10/148 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KRLH-----KELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYA 94
            :|.|     :|:....|.|.|.|..  |..|:..|.|.|. |.|..|....:|:.::||..||:.
Human    61 RRAHGPEELEEIRKCGMKNFRNIQV--DEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFK 122

  Fly    95 APVVKFLTSCFHPNVDLQGAICLDILK-DKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW 158
            .|.:.|.|..:|||:|.:|.:||.::. :.|........::.|:.:|:.:|..|.||.|..|..:
Human   123 PPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEY 187

  Fly   159 N-DQKEYKKYLDAFYEKH 175
            : |:|::.|..:.|.:|:
Human   188 SKDRKKFCKNAEEFTKKY 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vihNP_648582.1 COG5078 31..166 CDD:227410 41/137 (30%)
UQ_con 36..172 CDD:278603 42/142 (30%)
UBE2L3NP_001243284.1 COG5078 67..208 CDD:227410 42/142 (30%)
UBCc 67..207 CDD:214562 42/142 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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