DRSC/TRiP Functional Genomics Resources

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Protein Alignment vih and ube2e2

DIOPT Version :9

Sequence 1:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001003494.1 Gene:ube2e2 / 445100 ZFINID:ZDB-GENE-040801-237 Length:201 Species:Danio rerio


Alignment Length:174 Identity:61/174 - (35%)
Similarity:81/174 - (46%) Gaps:22/174 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PEQSGGAGGGGS-----------KHSDDSMPVKDNHAVS-----------KRLHKELMNLMMANE 49
            |:.|....||.|           :..|...|.|....:|           ||:.|||..:.:...
Zfish     8 PDDSPSTSGGSSDIEQRETAPPQQERDLVAPKKKETKISSKTAAKLSTSAKRIQKELAEITLDPP 72

  Fly    50 RGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGA 114
            ...||.|.|:||::|..||.||..:||.|..:.|.:.|...||:..|.|.|.|..:|.|::.||.
Zfish    73 PNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDIAFTPDYPFKPPKVTFRTRIYHCNINSQGV 137

  Fly   115 ICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW 158
            ||||||||.||....:..:||||.|||.:.|...||....|..:
Zfish   138 ICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vihNP_648582.1 COG5078 31..166 CDD:227410 53/139 (38%)
UQ_con 36..172 CDD:278603 51/123 (41%)
ube2e2NP_001003494.1 UQ_con 59..196 CDD:395127 51/123 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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