DRSC/TRiP Functional Genomics Resources

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Protein Alignment vih and Ubc84D

DIOPT Version :9

Sequence 1:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_524260.1 Gene:Ubc84D / 40900 FlyBaseID:FBgn0017456 Length:153 Species:Drosophila melanogaster


Alignment Length:151 Identity:43/151 - (28%)
Similarity:79/151 - (52%) Gaps:8/151 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 AVSKRLHKELMNLM---MANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPY 93
            |.::||.:||.:|:   |:..|.|.:  ..|::..|.|.:. |....|:...:|:.::||..||:
  Fly     2 AATRRLTRELSDLVEAKMSTLRNIES--SDESLLMWTGLLV-PEKAPYNKGAFRIEINFPPQYPF 63

  Fly    94 AAPVVKFLTSCFHPNVDLQGAICLDILK-DKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMM 157
            ..|.:.|.|..:|||||.:|.:||.|:. |.|........:|.::.:::..|..|.||.:..|..
  Fly    64 MPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEE 128

  Fly   158 W-NDQKEYKKYLDAFYEKHKD 177
            : .:.|::.|..:.|.:|:.:
  Fly   129 FVREHKKFMKTAEEFTKKNAE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vihNP_648582.1 COG5078 31..166 CDD:227410 40/138 (29%)
UQ_con 36..172 CDD:278603 40/140 (29%)
Ubc84DNP_524260.1 COG5078 1..150 CDD:227410 43/151 (28%)
UBCc 6..149 CDD:214562 42/145 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24068
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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