DRSC/TRiP Functional Genomics Resources

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Protein Alignment vih and ube2e3

DIOPT Version :9

Sequence 1:NP_648582.1 Gene:vih / 44118 FlyBaseID:FBgn0264848 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_957215.2 Gene:ube2e3 / 321689 ZFINID:ZDB-GENE-030131-408 Length:209 Species:Danio rerio


Alignment Length:182 Identity:58/182 - (31%)
Similarity:82/182 - (45%) Gaps:29/182 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SPEQSGGAGGGGSKHSDDSMPVKDNH-----------------------------AVSKRLHKEL 41
            |.::|.....|.|......:||.:..                             :.:||:.|||
Zfish     8 SDDESPSTSSGSSDADQRDLPVPEPEEQEERKQPTPPQQQKKSTKLSSKTTAKLSSSAKRIQKEL 72

  Fly    42 MNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFH 106
            ..:.:......||.|.|:||::|..||.||..:||.|..:.|.:.|.:.||:..|.|.|.|..:|
Zfish    73 AEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTFRTRIYH 137

  Fly   107 PNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW 158
            .|::.||.||||||||.||....:..:||||.|||.:.|...||....|..:
Zfish   138 CNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQY 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vihNP_648582.1 COG5078 31..166 CDD:227410 52/157 (33%)
UQ_con 36..172 CDD:278603 51/123 (41%)
ube2e3NP_957215.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53976
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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