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Protein Alignment vih and Ube2a
DIOPT Version :9
Sequence 1: | NP_648582.1 |
Gene: | vih / 44118 |
FlyBaseID: | FBgn0264848 |
Length: | 178 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001013955.1 |
Gene: | Ube2a / 298317 |
RGDID: | 1359534 |
Length: | 162 |
Species: | Rattus norvegicus |
Alignment Length: | 151 |
Identity: | 63/151 - (41%) |
Similarity: | 89/151 - (58%) |
Gaps: | 11/151 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 KRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVY--------SGQ--TYRLSLDFPN 89
:||.::...|......|:|..|...||..|...|.||..|.: :|| |::|:::|..
Rat 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKLTIEFTE 71
Fly 90 SYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQA 154
.||...|.|:|::..|||||...|:||||||:::||..|||.:||.||||||.|||..||.|:||
Rat 72 EYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQA 136
Fly 155 AMMWNDQK-EYKKYLDAFYEK 174
|.::.:.| ||:|.:.|..|:
Rat 137 AQLYQENKREYEKRVSAIVEQ 157
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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