DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and menE

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_416763.1 Gene:menE / 946741 ECOCYCID:EG12437 Length:451 Species:Escherichia coli


Alignment Length:534 Identity:108/534 - (20%)
Similarity:200/534 - (37%) Gaps:160/534 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 RGIIAGIYTTNSADAVQHVLESSHAQIVVVDDAKQM----------DKIHAIRDKLPKLKAAIQI 179
            |.:.|.:....|..|||.|:|.|...:...:..:.:          .::..:..:||:     .:
E. coli    31 RELCARVDELASGFAVQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQ-----PL 90

  Fly   180 QEPYSPYLKKE-----DGYYRWSEIESMNVSDVEDQYM-----TRLENVAINECCCLVYTSGTVG 234
            .|...|.|..:     ||...:..:.|:::..||..:.     |||        |.:..|||:.|
E. coli    91 LEELLPNLTLQFALVPDGENTFPALTSLHIQLVEGAHAATWQPTRL--------CSMTLTSGSTG 147

  Fly   235 MPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSY---------LPLSHVAAQTVDIYTCAFVA 290
            :||..:.::.......:|::           |::.:         |||.||:.|           
E. coli   148 LPKAAVHTYQAHLASAQGVL-----------SLIPFGDHDDWLLSLPLFHVSGQ----------- 190

  Fly   291 GCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLK 355
            |.:|   :....|..: :::|.:|.             |:|:|..:.:..:...|  |       
E. coli   191 GIMW---RWLYAGARM-TVRDKQPL-------------EQMLAGCTHASLVPTQL--W------- 229

  Fly   356 HYMVSQGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFLSLDLKIVDAFG 420
                               .|::::...:|   :.:.|..||.|:  |..:......::....:|
E. coli   230 -------------------RLLVNRSSVSL---KAVLLGGAAIPV--ELTEQAREQGIRCFCGYG 270

  Fly   421 MSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDANGHGELCIRGRHVFMGYIDNKEKTEESL 485
            ::|.|.  |:|..::.||..:|..|||.|.|.:|      .|:.:|...:..||..|.:.. ..:
E. coli   271 LTEFAS--TVCAKEADGLADVGSPLPGREVKIVN------NEVWLRAASMAEGYWRNGQLV-SLV 326

  Fly   486 DDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRK 550
            :|:.|..:.|.|.:.: |.:::.||...:.. :|||.|.|..:|..|... .|:...|:|     
E. coli   327 NDEGWYATRDRGEMHN-GKLTIVGRLDNLFF-SGGEGIQPEEVERVIAAH-PAVLQVFIV----- 383

  Fly   551 YLTVLITLKTEVDKDSGE---PLDELSHES---SVWVKSLGVEHKTVSDILAAGPCPKVWKSIED 609
                     ...||:.|.   .:.|..|||   |.|||          |.||....|..|.::..
E. coli   384 ---------PVADKEFGHRPVAVMEYDHESVDLSEWVK----------DKLARFQQPVRWLTLPP 429

  Fly   610 AIK----RANKQSI 619
            .:|    :.::|::
E. coli   430 ELKNGGIKISRQAL 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 108/534 (20%)
ACSBG_like 69..665 CDD:213299 108/534 (20%)
menENP_416763.1 PRK09029 1..451 CDD:236363 108/534 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I358
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24096
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
22.150

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