DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and caiC

DIOPT Version :10

Sequence 1:NP_524698.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_414579.4 Gene:caiC / 944886 ECOCYCID:EG11558 Length:517 Species:Escherichia coli


Alignment Length:567 Identity:124/567 - (21%)
Similarity:211/567 - (37%) Gaps:162/567 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 YGDYPALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIH 123
            ||...||..::.....:..:|.:..|::::.|..|..||:.:...|.:...||.|:.:...|...
E. coli    20 YGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAK 84

  Fly   124 ARGIIAGIYTTNSADAVQHVLESSHAQIVVV-------------DDAKQMDKIHAIRDKLPK--- 172
            ...|:..|......:....:|::|.|.::|.             :||.|:..|......||.   
E. coli    85 IGAIMVPINARLLCEESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDG 149

  Fly   173 LKAAIQI--QEP----YSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYTSG 231
            :.:..|:  |:|    |:|.|..:|    .:||                           ::|||
E. coli   150 VSSFTQLKNQQPATLCYAPPLSTDD----TAEI---------------------------LFTSG 183

  Fly   232 TVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFA 296
            |...||||:::|.|:.|  .|...|....:...:..::.:|..|:..|.. ....||.||     
E. coli   184 TTSRPKGVVITHYNLRF--AGYYSAWQCALRDDDVYLTVMPAFHIDCQCT-AAMAAFSAG----- 240

  Fly   297 DKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLK-HYMVS 360
                  .|.|                :.||:..|     :..|.::|..|:..:.|.:. ..::.
E. coli   241 ------ATFV----------------LVEKYSAR-----AFWGQVQKYRATVTECIPMMIRTLMV 278

  Fly   361 QGKSSGGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFLS-LDLKIVDAFGMSET 424
            |..|:...::::.:.:....                   :|.:.|..|.. ..::::.::||:||
E. coli   279 QPPSANDQQHRLREVMFYLN-------------------LSEQEKDAFCERFGVRLLTSYGMTET 324

  Fly   425 AGCHTICLPDSVGLNTIGKTLPG-------------CESKFINKDAN-----GH-GELCIR---G 467
            .          ||:  ||.. ||             |....|..|.|     |. ||:||:   |
E. coli   325 I----------VGI--IGDR-PGDKRRWPSIGRVGFCYEAEIRDDHNRPLPAGEIGEICIKGIPG 376

  Fly   468 RHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTI 532
            :.:|..|..|.:.|.:.|:.|.|||:||.|:.|::.:.....|... :|..||||:..|.:||.|
E. coli   377 KTIFKEYFLNPQATAKVLEADGWLHTGDTGYRDEEDFFYFVDRRCN-MIKRGGENVSCVELENII 440

  Fly   533 KKELDAISNAFLVG-------EQRKYLTVLITLKTEVDKDSGEPLDE 572
            ... ..|.:..:||       |..|...||         :.||.|.|
E. coli   441 AAH-PKIQDIVVVGIKDSIRDEAIKAFVVL---------NEGETLSE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_524698.1 ACSBG_like 69..665 CDD:341256 120/557 (22%)
caiCNP_414579.4 caiC 1..517 CDD:181195 124/567 (22%)

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