DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and FAA4

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_013974.1 Gene:FAA4 / 855288 SGDID:S000004860 Length:694 Species:Saccharomyces cerevisiae


Alignment Length:689 Identity:144/689 - (20%)
Similarity:287/689 - (41%) Gaps:111/689 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QDAVKIRMAKDGI-----GAEEPISVPGLLKRTVNNYGDYPALRTKNGKNGYHTVTYKQYEQKVH 87
            :|.:.|...|..|     |.::||      ::|...|...|          |.|:||::....:|
Yeast    62 RDIIDIHETKKTIVKRVDGKDKPI------EKTWLYYELTP----------YITMTYEEMICVMH 110

  Fly    88 QVAKAFIKLGLEEH--HSVGVLAFNCAEWFYSAMGAIHARGI-IAGIYTTNSADAVQHVLESSHA 149
            .:.:..||:|::.:  :...:.|....:|..:.:|.: ::|| :...|.|.....:.|.:..:.:
Yeast   111 DIGRGLIKIGVKPNGENKFHIFASTSHKWMKTFLGCM-SQGIPVVTAYDTLGESGLIHSMVETDS 174

  Fly   150 QIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDG---------------------Y 193
             :.:..|.:.:.|: |:..|..|....:...||..|..|:::|                     .
Yeast   175 -VAIFTDNQLLSKL-AVPLKTAKNVKFVIHNEPIDPSDKRQNGKLYKAAKDAVDKIKEVRPDIKI 237

  Fly   194 YRWSEIESM--NVSDVEDQYMTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKA 256
            |.:.||..:  ...|..:.:..:.|:.|     |::||||:.|.||||:|:|.||...:.|:   
Yeast   238 YSFDEIIEIGKKAKDEVELHFPKPEDPA-----CIMYTSGSTGTPKGVVLTHYNIVAGIGGV--- 294

  Fly   257 MDRVVVG----AESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKS----LQDAR 313
             ...|:|    .:.|:::|||:|:...|.: :...:..|.:.:|:...|..|..::    |.:.:
Yeast   295 -GHNVIGWIGPTDRIIAFLPLAHIFELTFE-FEAFYWNGILGYANVKTLTPTSTRNCQGDLMEFK 357

  Fly   314 PTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGK--SSGGFRYKIAKSL 376
            ||..:||..|:|..::.::|..:.       |..|::.:....|.:.:..  .||     :...|
Yeast   358 PTVMVGVAAVWETVRKGILAKINE-------LPGWSQTLFWTVYALKERNIPCSG-----LLSGL 410

  Fly   377 IMSKVKQALGFDRVLTLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTI 441
            |..::::|.|.:....|...:| :|.:.:|:..:|...::..:|::|......:..|:.......
Yeast   411 IFKRIREATGGNLRFILNGGSA-ISIDAQKFLSNLLCPMLIGYGLTEGVANACVLEPEHFDYGIA 474

  Fly   442 GKTLPGCESKFINKD------ANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVD 500
            |..:....:|.::.:      .|..|||..:|..:...|..|.|:|..:..||.|..:||:....
Yeast   475 GDLVGTITAKLVDVEDLGYFAKNNQGELLFKGAPICSEYYKNPEETAAAFTDDGWFRTGDIAEWT 539

  Fly   501 DKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKD 565
            .||.|.:..|.|.::.|..||.|....:| :|.:....:.|..:..::.|...|.|     |..:
Yeast   540 PKGQVKIIDRKKNLVKTLNGEYIALEKLE-SIYRSNPYVQNICVYADENKVKPVGI-----VVPN 598

  Fly   566 SGEPLDELSHESSVWVKSLGVE----HKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQ 626
            .|. |.:|:.|..:.|....||    .|.:.|.:.           :|.:..|..|.::..:.:.
Yeast   599 LGH-LSKLAIELGIMVPGEDVESYIHEKKLQDAVC-----------KDMLSTAKSQGLNGIELLC 651

  Fly   627 KFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            .......:::...|.:....|:||..:......::|::|
Yeast   652 GIVFFEEEWTPENGLVTSAQKLKRRDILAAVKPDVERVY 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 143/685 (21%)
ACSBG_like 69..665 CDD:213299 133/641 (21%)
FAA4NP_013974.1 LC_FACS_euk1 96..678 CDD:341294 133/635 (21%)
PRK04319 <230..>285 CDD:235279 17/59 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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