DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and FAA3

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_012257.1 Gene:FAA3 / 854808 SGDID:S000001271 Length:694 Species:Saccharomyces cerevisiae


Alignment Length:685 Identity:133/685 - (19%)
Similarity:283/685 - (41%) Gaps:106/685 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGK-------------NGYHTVTYKQYEQKVHQ 88
            :||:...:.|.:.. .|:|:        :|..:||             :.|..:||::....:|.
Yeast    56 RDGMAWRDVIEIHE-TKKTI--------VRKVDGKDKSIEKTWLYYEMSPYKMMTYQELIWVMHD 111

  Fly    89 VAKAFIKLGLEEH--HSVGVLAFNCAEWFYSAMGAIHARGI-IAGIYTTNSADAVQHVLESSHAQ 150
            :.:...|:|::.:  |...:.|....:|....:|.| ::|| :...|.|.....:.|.:..:.:.
Yeast   112 MGRGLAKIGIKPNGEHKFHIFASTSHKWMKIFLGCI-SQGIPVVTAYDTLGESGLIHSMVETESA 175

  Fly   151 IVVVDD---AKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDG-------------------- 192
            .:..|:   ||.:..:.:.:|    :|..|. .||..|..::::|                    
Yeast   176 AIFTDNQLLAKMIVPLQSAKD----IKFLIH-NEPIDPNDRRQNGKLYKAAKDAINKIREVRPDI 235

  Fly   193 -YYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKA 256
             .|.:.|:..:.....::   .:|......:..|::||||::..||||:|:|.||...:.|:...
Yeast   236 KIYSFEEVVKIGKKSKDE---VKLHPPEPKDLACIMYTSGSISAPKGVVLTHYNIVSGIAGVGHN 297

  Fly   257 MDRVVVGAESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKS----LQDARPTRF 317
            :...:...:.::|:|||:|: .:.|..:...:..|.:.:.....|..|..::    |.:.:||..
Yeast   298 VFGWIGSTDRVLSFLPLAHI-FELVFEFEAFYWNGILGYGSVKTLTNTSTRNCKGDLVEFKPTIM 361

  Fly   318 MGVPRVYEKFQERMV-AVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKV 381
            :||..|:|..::.:: .::..:..|:|:.  |:     .:.|..:.....||    ...::..||
Yeast   362 IGVAAVWETVRKAILEKISDLTPVLQKIF--WS-----AYSMKEKSVPCTGF----LSRMVFKKV 415

  Fly   382 KQALGFDRVLTLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLP 446
            :||.| ..:..:.:..:.:|.:.:|:|..:...::..:|::||.....:..||......:|..:.
Yeast   416 RQATG-GHLKYIMNGGSAISIDAQKFFSIVLCPMIIGYGLTETVANACVLEPDHFEYGIVGDLVG 479

  Fly   447 GCESKFIN-KD-----ANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYV 505
            ...:|.:: ||     .|..|||.::|..|...|..|..:|..|...|.|..:||:.....||.:
Yeast   480 SVTAKLVDVKDLGYYAKNNQGELLLKGAPVCSEYYKNPIETAVSFTYDGWFRTGDIVEWTPKGQL 544

  Fly   506 SLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPL 570
            .:..|.|.::.|..||.|....:|:..:.. ..:.|..:..::.:...|.|.:      .:..||
Yeast   545 KIIDRRKNLVKTLNGEYIALEKLESVYRSN-SYVKNICVYADESRVKPVGIVV------PNPGPL 602

  Fly   571 DELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDA-----IKRANKQSISNAQKVQKFTI 630
            .:.:.:..:..|...:|: .:.|           |::.:|     |..|..|.:...:.:.....
Yeast   603 SKFAVKLRIMKKGEDIEN-YIHD-----------KALRNAVFKEMIATAKSQGLVGIELLCGIVF 655

  Fly   631 LPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            ...:::...|.:....|:||..:......|:|::|
Yeast   656 FDEEWTPENGFVTSAQKLKRREILAAVKSEVERVY 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 133/685 (19%)
ACSBG_like 69..665 CDD:213299 126/651 (19%)
FAA3NP_012257.1 LC_FACS_euk1 95..678 CDD:341294 122/623 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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