DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and FAA3

DIOPT Version :10

Sequence 1:NP_524698.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_012257.1 Gene:FAA3 / 854808 SGDID:S000001271 Length:694 Species:Saccharomyces cerevisiae


Alignment Length:685 Identity:133/685 - (19%)
Similarity:283/685 - (41%) Gaps:106/685 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KDGIGAEEPISVPGLLKRTVNNYGDYPALRTKNGK-------------NGYHTVTYKQYEQKVHQ 88
            :||:...:.|.:.. .|:|:        :|..:||             :.|..:||::....:|.
Yeast    56 RDGMAWRDVIEIHE-TKKTI--------VRKVDGKDKSIEKTWLYYEMSPYKMMTYQELIWVMHD 111

  Fly    89 VAKAFIKLGLEEH--HSVGVLAFNCAEWFYSAMGAIHARGI-IAGIYTTNSADAVQHVLESSHAQ 150
            :.:...|:|::.:  |...:.|....:|....:|.| ::|| :...|.|.....:.|.:..:.:.
Yeast   112 MGRGLAKIGIKPNGEHKFHIFASTSHKWMKIFLGCI-SQGIPVVTAYDTLGESGLIHSMVETESA 175

  Fly   151 IVVVDD---AKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDG-------------------- 192
            .:..|:   ||.:..:.:.:|    :|..|. .||..|..::::|                    
Yeast   176 AIFTDNQLLAKMIVPLQSAKD----IKFLIH-NEPIDPNDRRQNGKLYKAAKDAINKIREVRPDI 235

  Fly   193 -YYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKA 256
             .|.:.|:..:.....::   .:|......:..|::||||::..||||:|:|.||...:.|:...
Yeast   236 KIYSFEEVVKIGKKSKDE---VKLHPPEPKDLACIMYTSGSISAPKGVVLTHYNIVSGIAGVGHN 297

  Fly   257 MDRVVVGAESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKS----LQDARPTRF 317
            :...:...:.::|:|||:|: .:.|..:...:..|.:.:.....|..|..::    |.:.:||..
Yeast   298 VFGWIGSTDRVLSFLPLAHI-FELVFEFEAFYWNGILGYGSVKTLTNTSTRNCKGDLVEFKPTIM 361

  Fly   318 MGVPRVYEKFQERMV-AVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKV 381
            :||..|:|..::.:: .::..:..|:|:.  |:     .:.|..:.....||    ...::..||
Yeast   362 IGVAAVWETVRKAILEKISDLTPVLQKIF--WS-----AYSMKEKSVPCTGF----LSRMVFKKV 415

  Fly   382 KQALGFDRVLTLASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLP 446
            :||.| ..:..:.:..:.:|.:.:|:|..:...::..:|::||.....:..||......:|..:.
Yeast   416 RQATG-GHLKYIMNGGSAISIDAQKFFSIVLCPMIIGYGLTETVANACVLEPDHFEYGIVGDLVG 479

  Fly   447 GCESKFIN-KD-----ANGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYV 505
            ...:|.:: ||     .|..|||.::|..|...|..|..:|..|...|.|..:||:.....||.:
Yeast   480 SVTAKLVDVKDLGYYAKNNQGELLLKGAPVCSEYYKNPIETAVSFTYDGWFRTGDIVEWTPKGQL 544

  Fly   506 SLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPL 570
            .:..|.|.::.|..||.|....:|:..:.. ..:.|..:..::.:...|.|.:      .:..||
Yeast   545 KIIDRRKNLVKTLNGEYIALEKLESVYRSN-SYVKNICVYADESRVKPVGIVV------PNPGPL 602

  Fly   571 DELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDA-----IKRANKQSISNAQKVQKFTI 630
            .:.:.:..:..|...:|: .:.|           |::.:|     |..|..|.:...:.:.....
Yeast   603 SKFAVKLRIMKKGEDIEN-YIHD-----------KALRNAVFKEMIATAKSQGLVGIELLCGIVF 655

  Fly   631 LPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            ...:::...|.:....|:||..:......|:|::|
Yeast   656 FDEEWTPENGFVTSAQKLKRREILAAVKSEVERVY 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_524698.1 ACSBG_like 69..665 CDD:341256 126/651 (19%)
FAA3NP_012257.1 LC_FACS_euk1 95..678 CDD:341294 122/623 (20%)

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