DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and LACS2

DIOPT Version :10

Sequence 1:NP_524698.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_175368.2 Gene:LACS2 / 841367 AraportID:AT1G49430 Length:665 Species:Arabidopsis thaliana


Alignment Length:687 Identity:172/687 - (25%)
Similarity:300/687 - (43%) Gaps:109/687 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KIRMAKDGIGAEEPISVPG---LLKRTVNNYGDYPALR---TKNGKNGYHT-VTYKQYEQKVHQV 89
            :.:.||||: .:.|..:..   .....|..|.:...|.   |.:.|.|.:| :|||:......::
plant    29 RCKYAKDGL-LDLPTDIDSPWQFFSEAVKKYPNEQMLGQRVTTDSKVGPYTWITYKEAHDAAIRI 92

  Fly    90 AKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGI-IAGIYTTNSADAVQHVLESSHAQIVV 153
            ..|....|::..|..|:...||.||.. ||.|..::|| ...:|.:...:||:.::..:...:|.
plant    93 GSAIRSRGVDPGHCCGIYGANCPEWII-AMEACMSQGITYVPLYDSLGVNAVEFIINHAEVSLVF 156

  Fly   154 VDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKED------GYYRWSEIESMNVSDVEDQYM 212
            |.:......:...:.....||..:...|..|  .:||:      ..:.|:|...|  .::::..:
plant   157 VQEKTVSSILSCQKGCSSNLKTIVSFGEVSS--TQKEEAKNQCVSLFSWNEFSLM--GNLDEANL 217

  Fly   213 TRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAM---DRVVVGAESIVSYLPLS 274
            .|.....|   |.::|||||.|.||||:|::..|:..|..|.|.:   ||....::...|||||:
plant   218 PRKRKTDI---CTIMYTSGTTGEPKGVILNNAAISVQVLSIDKMLEVTDRSCDTSDVFFSYLPLA 279

  Fly   275 HVAAQTVDIYTCAFVAGCIWFADKDALKG-------TLVKSLQDARPTRFMGVPRVYEKFQERMV 332
            |...|.::||          |..:.:..|       .|:..:|..:||.|.||||||:|....::
plant   280 HCYDQVMEIY----------FLSRGSSVGYWRGDIRYLMDDVQALKPTVFCGVPRVYDKLYAGIM 334

  Fly   333 AVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAK----SLIMSKVKQALGFDRVLTL 393
            ...|:||.::|.|..:|       |....|....||..:.|.    .|:..|:|:||| .|...|
plant   335 QKISASGLIRKKLFDFA-------YNYKLGNMRKGFSQEEASPRLDRLMFDKIKEALG-GRAHML 391

  Fly   394 ASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVG------------LNTIGKTLP 446
            .|.|||:....:::     |:|:.|..:|:..|     |.:|.|            :.|:|..:|
plant   392 LSGAAPLPRHVEEF-----LRIIPASNLSQGYG-----LTESCGGSFTTLAGVFSMVGTVGVPMP 446

  Fly   447 GCESKFINKDANGH---------GELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDK 502
            ..|::.::....|:         ||:|:||..:|.||...::.|::.|.|. |.|:||:|...:.
plant   447 TVEARLVSVPEMGYDAFSADVPRGEICLRGNSMFSGYHKRQDLTDQVLIDG-WFHTGDIGEWQED 510

  Fly   503 GYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSG 567
            |.:.:..|.|.|...:.||.:...::|||..: ...|:..::.|...:...|.:.:.   |:.:.
plant   511 GSMKIIDRKKNIFKLSQGEYVAVENLENTYSR-CPLIAQIWVYGNSFESFLVGVVVP---DRKAI 571

  Fly   568 EPLDELSHESSVWVKSLGVEHKTVSDILAAGPCP--KVWKSIEDAIKRANKQ-SISNAQKVQKFT 629
            |...:|:::|....:||               |.  |..|...|.:....|| .:...:.::...
plant   572 EDWAKLNYQSPNDFESL---------------CQNLKAQKYFLDELNSTAKQYQLKGFEMLKAIH 621

  Fly   630 ILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLYA 666
            :.|:.|.|....:.||.|:||..:.:.|...:::||:
plant   622 LEPNPFDIERDLITPTFKLKRPQLLQHYKGIVDQLYS 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_524698.1 ACSBG_like 69..665 CDD:341256 161/641 (25%)
LACS2NP_175368.2 PLN02861 3..665 CDD:178452 172/687 (25%)

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