DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and LACS4

DIOPT Version :10

Sequence 1:NP_524698.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_194116.1 Gene:LACS4 / 828484 AraportID:AT4G23850 Length:666 Species:Arabidopsis thaliana


Alignment Length:674 Identity:173/674 - (25%)
Similarity:298/674 - (44%) Gaps:95/674 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AKDGIGAEEPI----SVPGLLKRTVNNYGDYPALRTK---NGKNG-YHTVTYKQYEQKVHQVAKA 92
            ||||.  .:||    |...:.:.:|..|.:.|.|..:   :||.| |...||::....|.::..:
plant    33 AKDGF--PDPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVMKLGNS 95

  Fly    93 FIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGI-IAGIYTTNSADAVQHVLESSHAQIVVVDD 156
            ...:|:::....|:...|..||..| |.|.:|.|: ...:|.|..||||:.::..|...||.|::
plant    96 LRSVGVKDEAKCGIYGANSPEWIIS-MEACNAHGLYCVPLYDTLGADAVEFIISHSEVSIVFVEE 159

  Fly   157 AKQMDKIHAIRDKLPKLKAAIQI----QEPYSPYLKKEDG------YYRWSEIESMNVSDVEDQY 211
            .|..:......:....:|..:..    :|      :||:.      .|.|.|...:......|..
plant   160 KKISELFKTCPNSTEYMKTVVSFGGVSRE------QKEEAETFGLVIYAWDEFLKLGEGKQYDLP 218

  Fly   212 MTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIV---KAMDRVVVGAESIVSYLPL 273
            :.:..::     |.::|||||.|.|||||:|:::|...:.|::   |:.:..:...:..:|||||
plant   219 IKKKSDI-----CTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANEALTVKDVYLSYLPL 278

  Fly   274 SHVAAQTVDIYTCAFVAGC---IWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVA 335
            :|:..:.::  .|....|.   .|..|..    .|::.|.:.:||.|..||||.::....:....
plant   279 AHIFDRVIE--ECFIQHGAAIGFWRGDVK----LLIEDLAELKPTIFCAVPRVLDRVYSGLQKKL 337

  Fly   336 SSSGSLKKMLASWAKGITLKHYMVSQGKS----SGGFRYKIAKSLIMSKVKQALGFDRVLTLASA 396
            |..|.|||.:  :....:.|...:.:|:|    |..|     ..|:.|||||.|| ..|..:.|.
plant   338 SDGGFLKKFI--FDSAFSYKFGYMKKGQSHVEASPLF-----DKLVFSKVKQGLG-GNVRIILSG 394

  Fly   397 AAPMSPETKKYFLSLDLKIV------DAFGMSETAGCHTICLPDSVG-LNTIGKTLPGCESKF-- 452
            |||::...:.:     |::|      ..:|::|:.....:.|||.:| |.|:|..:|..:.:.  
plant   395 AAPLASHVESF-----LRVVACCHVLQGYGLTESCAGTFVSLPDELGMLGTVGPPVPNVDIRLES 454

  Fly   453 ---INKDA---NGHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRS 511
               :..||   ...||:||||:.:|.||...::.|:|.|.|. |||:||:|.....|.:.:..|.
plant   455 VPEMEYDALASTARGEICIRGKTLFSGYYKREDLTKEVLIDG-WLHTGDVGEWQPDGSMKIIDRK 518

  Fly   512 KEIIITAGGENIPPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHE 576
            |.|...:.||.:...:||| |..|:.|:.:.::.|...:...:.|....:             |.
plant   519 KNIFKLSQGEYVAVENIEN-IYGEVQAVDSVWVYGNSFESFLIAIANPNQ-------------HI 569

  Fly   577 SSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDAIKRANKQSISNAQKVQKFTILPHDFSIPTGE 641
            ...|....||...  .|.|......|.: .:.:.:|.|.::.:...:.::...:.|..|.:....
plant   570 LERWAAENGVSGD--YDALCQNEKAKEF-ILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDL 631

  Fly   642 LGPTLKVKRNVVSKMYADEIEKLY 665
            |.||.|.||..:.|.|...|:::|
plant   632 LTPTFKKKRPQLLKYYQSVIDEMY 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_524698.1 ACSBG_like 69..665 CDD:341256 161/632 (25%)
LACS4NP_194116.1 PLN02614 1..666 CDD:166255 173/674 (26%)

Return to query results.
Submit another query.