DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and acsl6

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_012814668.1 Gene:acsl6 / 779783 XenbaseID:XB-GENE-5834989 Length:731 Species:Xenopus tropicalis


Alignment Length:641 Identity:165/641 - (25%)
Similarity:291/641 - (45%) Gaps:92/641 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLE--EHHSVGVLAFNCAEWFYSAMGAIHAR 125
            |.|.::.....|..:||::...:...:....::.|.:  ....:||.|.|..||..|.:......
 Frog   140 PCLGSRKSNQPYEWLTYREVSDRAQCLGSGLLQQGCKSCSDQFIGVFAQNRPEWIISELACYTYS 204

  Fly   126 GIIAGIYTTNSADAVQHVLESSHAQIVVVDDAKQMDKI-----HAIRDKLPKLKAAIQIQEPYSP 185
            .::..:|.|....|:::::.::....|:.|   ::||.     |..:.:.|.||:.: :.:|...
 Frog   205 MVVVPLYDTLGQGAIRYIINTADISTVICD---KIDKANILLEHVEKGETPGLKSVV-LMDPVDA 265

  Fly   186 YLKKEDGYYRWSEIESMNVSDVEDQYMTRL--------ENVAINECCCLVYTSGTVGMPKGVMLS 242
            .|.:..   |...::...:..||:.....|        |:::|     :.:||||.|.|||.||:
 Frog   266 QLLERG---RRCAVKIQTMQQVEEIGKRNLRPPLPPTPEDLSI-----VCFTSGTTGNPKGAMLT 322

  Fly   243 HDNITFDVRGIVKAMDRVVVGAES--IVSYLPLSHVAAQTV-DIYTCAFVAGCIWFADKDALKGT 304
            |.|:..|..|.:|..::|:...:.  ::|:|||:|:..:.: .:..|.  .|.|.|...|     
 Frog   323 HGNVVADFSGFLKVTEKVIFPTQDDVLISFLPLAHMFERVIQSVVYCH--GGRIGFFQGD----- 380

  Fly   305 LVKSLQD----ARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSS 365
             ::.|.|    .|||.|..|||:..:..:::.:.|.:  |:|:.:..:|  ...|...|.:|...
 Frog   381 -IRLLSDDMKTLRPTIFPVVPRLLNRMYDKIFSQADT--SIKRWILEFA--AKRKEAEVRRGVIR 440

  Fly   366 GGFRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFL--SLDLKIVDAFGMSE-TAGC 427
            ..   .:...|:.:||:.:|| .|:..:.:.|||.|| |...||  :|..::.:.:|.:| ||||
 Frog   441 NN---SLWDRLLFNKVQASLG-GRLRMIVTGAAPASP-TVLGFLRAALGCQVYEGYGQTECTAGC 500

  Fly   428 HTICLPDSVGLNTIGKTLPGCESKFINK------DANGHGELCIRGRHVFMGYIDNKEKTEESLD 486
             |...|.......:|..||....|.::.      .|.|.||:|::|.:||.||:.:|.||.|:||
 Frog   501 -TFTTPGDWTSGHVGAPLPCNYIKLVDVVEMSYFAAKGEGEICVKGPNVFKGYLKDKVKTAEALD 564

  Fly   487 DDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENT-IKKELDAISNAFLVGEQ-R 549
            ::.||::||:|.....|.:.:..|.|.|...|.||.|.|..|||. |:.|  .:|..::.|:. :
 Frog   565 EEGWLYTGDVGKWLPSGTLKIIDRKKHIFKLAQGEYIAPEKIENIYIRSE--PVSQIYVHGDSLQ 627

  Fly   550 KYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHKTVS-----DILAAGPCPKVWKSIED 609
            .:|..::....||              ...|.|..|.:...:.     |:..|        .:||
 Frog   628 AFLVGIVVPDAEV--------------MPAWAKKKGFDESFMELCNNLDLKKA--------IMED 670

  Fly   610 AIKRANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            .::...:..:.:.::|:...|....|||..|.|.||||.||..:...:..:||:||
 Frog   671 LLRLGKESGLHSFEQVKAIHIHTEMFSIQNGLLTPTLKAKRPELRDFFKLQIEELY 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 165/641 (26%)
ACSBG_like 69..665 CDD:213299 161/633 (25%)
acsl6XP_012814668.1 PLN02736 113..730 CDD:178337 165/641 (26%)
LC-FACS_euk 149..726 CDD:213293 161/630 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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