DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and acsl3a

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001038593.1 Gene:acsl3a / 567157 ZFINID:ZDB-GENE-050420-181 Length:713 Species:Danio rerio


Alignment Length:642 Identity:144/642 - (22%)
Similarity:264/642 - (41%) Gaps:106/642 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 YHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSAD 138
            |..::|:|..::|:........||.:...::.:.....|||..:|.........:..:|:|....
Zfish   125 YRWMSYEQVFKEVNAFGSGLAALGQKPMKNIAIFCETRAEWIIAAQACFMYNFPLVTLYSTLGGP 189

  Fly   139 AVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESM- 202
            |:.|.|..:....::........|:.:|..::|:|...|.:.:.    |.....|.|...|.|| 
Zfish   190 AIAHGLNEAEVSHIITSKDLLETKLKSIFIEVPRLCHVIVVDDK----LSTSSEYPRGISIHSMA 250

  Fly   203 NVSDVEDQYMTRLENVA-------INECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRV 260
            :|.::.    .|.||.:       .::...::||||:.|:|||||:||.||...:.|:...:.::
Zfish   251 SVKELG----ARPENASKPKNPPCSSDVAVIMYTSGSTGVPKGVMISHSNIISGITGMTHRIPKL 311

  Fly   261 VVGAESIVSYLPLSHVAAQTVDIYTCAFVAGC-IWFADKDAL--KGTLVK-----SLQDARPTRF 317
            |.. ::.:.||||:||...:.::...|.  || |.::....|  :.|.:|     .:...|||..
Zfish   312 VED-DTYIGYLPLAHVLELSAEMVCLAH--GCRIGYSSPQTLSDQSTKIKKGSRGDISVLRPTLM 373

  Fly   318 MGVPRVYEK-FQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSSGGFRYKIAKSLIMSKV 381
            ..||.:.:: ::..|:.|...||        :.:.:.|..|.....:.:.|:...:...|:..||
Zfish   374 AAVPEIMDRIYKNVMLRVEQMSG--------FQRTLFLLAYNYKMEQLAMGYSTPLCDKLVFRKV 430

  Fly   382 KQALGFDRVLTLASAAAPMSPETKKYF-LSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTL 445
            :..|| .|:..|.|..||:|..|:::. :.....:...:|::||.|..||..........:|..|
Zfish   431 RALLG-GRLRVLLSGGAPLSAATQRFMNICFCCPVGQGYGLTETCGAGTISHLWDYSTGRVGAPL 494

  Fly   446 PGCESKFINKDANGH---------GELCIRGRHVFMGYIDNKEKTEESLDDD----CWLHSGDLG 497
            ..||.:..:....|:         ||:.:.|..:.|||..|..||.|....|    .|..:||:|
Zfish   495 VCCELQLKDWIEGGYHSTDLPCPRGEILVGGPSITMGYYKNTHKTSEDFFVDKKGQRWFCTGDIG 559

  Fly   498 FVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKK-----ELDAISNA-------FLVGEQRK 550
            .:...|.:.:..|.|:::....||.:....:|..:|.     .:.|.:|:       |:|..|::
Zfish   560 EIHGDGCLKIIDRKKDLVKLQAGEYVSLGKVEAALKNCPLVDNICAYANSDESYVIGFVVPNQKQ 624

  Fly   551 YLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDAIKRAN 615
            .|.                |.|......:|            :.|...|.      ||:|:....
Zfish   625 LLA----------------LAERKRVRGLW------------EELCNNPV------IEEAVLTVL 655

  Fly   616 KQSISNAQKVQKFTILPHDFSI-------PTGELGPTLKVKRNVVSKMYADEIEKLY 665
            .::...|| :::|.| |....:       .||.:..:.|:||..:...|.::||::|
Zfish   656 TEAALTAQ-LERFEI-PRKIRLSVEPWTPDTGLVTDSFKLKRKELKTHYQNDIERMY 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 144/642 (22%)
ACSBG_like 69..665 CDD:213299 143/640 (22%)
acsl3aNP_001038593.1 PLN02387 77..710 CDD:215217 143/640 (22%)
LC-FACS_euk 123..710 CDD:213293 143/640 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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