DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and acsl1b

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001003569.1 Gene:acsl1b / 445175 ZFINID:ZDB-GENE-040801-88 Length:697 Species:Danio rerio


Alignment Length:639 Identity:163/639 - (25%)
Similarity:283/639 - (44%) Gaps:87/639 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PALRTKNGKNGYHTVTYKQYEQKVHQVAKAFIKLGLEEHHS------VGVLAFNCAEWFYSAMGA 121
            |.|.::..|..|..::|.:..::...:..||:..|    ||      :|:.:.|..||..:.:..
Zfish   107 PCLGSRKPKQPYEWLSYSEVIERAEHLGSAFLHKG----HSKSGDPYIGIFSQNRPEWTIAELAC 167

  Fly   122 IHARGIIAGIYTTNSADAVQHVLESSHAQIVVVDDAKQMDKI--------HAIRDKLPKLKAAIQ 178
            .....|...:|.|...:|:.::|:.:....||.|..::...:        |:::..:........
Zfish   168 YTYSLISVPLYDTLGTEAISYILDKTCISTVVCDVPEKAGLLLECVSGRQHSVKTLILMADVDAD 232

  Fly   179 IQEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMT---RLENVAINECCCLVYTSGTVGMPKGVM 240
            :|.     ..::.|      |:.::::|.|:...|   :.|....::...:.:||||.|.|||.|
Zfish   233 LQS-----RAQQCG------IQIISLTDAENMGKTHRRQPEPPQPDDLAVICFTSGTTGNPKGAM 286

  Fly   241 LSHDNITFDVRGIVKAMDRV--VVGAESIVSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKG 303
            |:|.||..::...:...:..  :...:|.:|||||:|:..:.|........|...:|      :|
Zfish   287 LTHRNIVSNISAFIHVTNSTCPLSSRDSHISYLPLAHMFERVVQGVVLLHGARIGYF------QG 345

  Fly   304 ---TLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKHYMVSQGKSS 365
               .|:..|...:||.|..|||:..:..:::...|::  .||:.|..:|       :...:.:..
Zfish   346 DIRVLMDDLIALKPTIFPVVPRLLNRMFDKIYGQANT--PLKRRLLEFA-------FRRKEAEMK 401

  Fly   366 GGF--RYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFL--SLDLKIVDAFGMSETAG 426
            .|.  |..|...:|..||:.::| ..|..:.:.|||:| |....||  :|..:..:.:|.:|...
Zfish   402 SGIMRRDSIWDKIIFKKVQASVG-GCVRMMVTGAAPIS-EPVLTFLRAALGCQFYEGYGQTECTA 464

  Fly   427 CHTICLPDSVGLNTIGKTLPGCESKFIN------KDANGHGELCIRGRHVFMGYIDNKEKTEESL 485
            ..|..||.......:|..||..:.|.::      ..|||.||:|:||.:.|.||:.:.|||:|:|
Zfish   465 GSTTTLPGDWTAGHVGAPLPCNDIKLVDVAEMNYYAANGEGEVCVRGPNAFKGYLKDPEKTKEAL 529

  Fly   486 DDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENT-IKKELDAISNAFLVGEQR 549
            |::.|:|:||:|.....|.:.:..|.|.|...|.||.|.|..|||. |:.|  |:..||:.|:..
Zfish   530 DEEGWVHTGDIGRWLPNGSLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSE--AVVQAFVHGDSL 592

  Fly   550 KYLTVLITLKTEVDKD--SGEPLDELSHESSVWVKSLGVEHKTVSDILAAGPCPKVWKSIEDAIK 612
            :...|.|.:.   |.|  .|            |.|..|:| .|..|:.......|.  .:||.||
Zfish   593 QACLVAIIVP---DPDFLPG------------WAKKRGIE-GTYEDLCKNKDIKKA--ILEDIIK 639

  Fly   613 RANKQSISNAQKVQKFTILPHDFSIPTGELGPTLKVKRNVVSKMYADEIEKLYA 666
            ...:..:.:.::|:...:....|:|..|.|.||||.||..:...:...|::|||
Zfish   640 LGKESGLKSFEQVKDIALHSEMFTIQNGLLTPTLKAKRADLRNHFRSHIDELYA 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 161/637 (25%)
ACSBG_like 69..665 CDD:213299 158/630 (25%)
acsl1bNP_001003569.1 PLN02736 88..695 CDD:178337 163/639 (26%)
LC-FACS_euk 116..692 CDD:213293 157/627 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1022
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.