DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and Fatp3

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_726437.2 Gene:Fatp3 / 37887 FlyBaseID:FBgn0034999 Length:687 Species:Drosophila melanogaster


Alignment Length:550 Identity:112/550 - (20%)
Similarity:205/550 - (37%) Gaps:140/550 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 QYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTN-SADAVQHVL 144
            ::.||   :|..|...|||....|.:|.....|:....:| :...|:|..:..:| ..:::.|.:
  Fly   146 EFSQK---IAGYFSDRGLERGDCVALLMETRLEYPCIWLG-LSQLGVITALINSNLRGESLLHSI 206

  Fly   145 ESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQE-PYSPYLKKEDGYYRWSEIESMNVS--- 205
            :.::|:.::| .::.:|.:.::|:|       .|:.| |          .|::::.|...|:   
  Fly   207 KVANAKALIV-GSELLDVLVSLREK-------EQLDEVP----------IYQYTDDEVRGVAGHD 253

  Fly   206 ------DVEDQYMTRLENVAINECCC---------LVYTSGTVGMPKGVMLSHDNITFDVRG--- 252
                  |:.....|: :.:.:....|         .||||||.|:||..::::....|...|   
  Fly   254 LLPGAVDLVTALKTQ-KKLELPSAVCPGEARSKLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYY 317

  Fly   253 -IVKAMDRVVVGAESIVSYLPLSHVAAQTVDIYTC-----------AFVAGCIWFADKDALKGTL 305
             :..:.|.||...      |||.|.|...|.:...           .|.|...|. |.|....|:
  Fly   318 MLKMSSDDVVYDP------LPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWL-DCDRHNCTV 375

  Fly   306 VKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGITLKH----YMVSQGKSSG 366
            .:.:.:.  .|::.........|:..:.:...:|...::.:.:.:...:.|    |..::|.|  
  Fly   376 AQYIGEL--CRYLLATSYSPDQQKHNLRLMYGNGLRPQIWSQFVRRFGIPHIGEIYGATEGNS-- 436

  Fly   367 GFRYKIAKSLI-MSKVKQALGFDRVLTLASAAAPMSPETKKYFLSLDLKIVDAFG--MSETAGCH 428
                    :|| ::....|:||  |....|:..|:..          |:..:..|  :.::.| |
  Fly   437 --------NLINITNRVGAIGF--VPVYGSSLYPVQV----------LRCDEYTGELLKDSKG-H 480

  Fly   429 TI-CLPDSVGLNTIGKTLPGCESKFINKDANGHGELCIRGRHVFMGYIDNKEKTEESL------D 486
            .| |.|...|| .:||.           ||.       |....|.||.| |..:|:.|      .
  Fly   481 CIRCQPGQAGL-LVGKV-----------DAR-------RAVSAFHGYAD-KGASEQKLLRNVFTS 525

  Fly   487 DDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIKKELDAI-------SNAFL 544
            .|.:.:|||:...|..||.....|:.:.....|         ||...:|::||       .:..:
  Fly   526 GDVFFNSGDMVVRDILGYFYFKDRTGDTFRWRG---------ENVATQEVEAIITNCVGLEDCVV 581

  Fly   545 VGEQRKYLTVLITLKTEVDKDSGEPLDELS 574
            .|.|..::.....:...||.:....:|.||
  Fly   582 YGVQIPHVEGKAGMAAIVDPERKVDMDYLS 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 111/549 (20%)
ACSBG_like 69..665 CDD:213299 111/549 (20%)
Fatp3NP_726437.2 PRK08279 90..684 CDD:236217 111/549 (20%)
hsFATP4_like 136..653 CDD:213305 111/549 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452200
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.