DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgm and hll

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_609696.1 Gene:hll / 34822 FlyBaseID:FBgn0286723 Length:681 Species:Drosophila melanogaster


Alignment Length:681 Identity:303/681 - (44%)
Similarity:442/681 - (64%) Gaps:31/681 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 NRLRQADAYRTTNRQDAVKIRMAKDGIGAE--EPISVPGLLKRTVNNYGDYPAL---RTKNGKNG 73
            |.|:.|.:||:|:..||||:|:.:....::  .|.::|...|.:...|.|.|||   ...:|.:|
  Fly     2 NDLKPATSYRSTSLHDAVKLRLDEPSSFSQTVPPQTIPEFFKESCEKYSDLPALVWETPGSGNDG 66

  Fly    74 YHTVTYKQYEQKVHQVAKAFIKLGLEEHHSVGVLAFNCAEWFYSAMGAIHARGIIAGIYTTNSAD 138
            :.|:|:.:|:::|.|.|...:.:|:||..|||:|||||.|||::..||:.|..::||:|.:|||:
  Fly    67 WTTLTFGEYQERVEQAALMLLSVGVEERSSVGILAFNCPEWFFAEFGALRAGAVVAGVYPSNSAE 131

  Fly   139 AVQHVLESSHAQIVVVDDAKQMDKIHAIRDKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESMN 203
            ||.|||.:..:.:.|||||:||.|:.||:::||:|||.||:..|:..::..|.||:.|.:::...
  Fly   132 AVHHVLATGESSVCVVDDAQQMAKLRAIKERLPRLKAVIQLHGPFEAFVDHEPGYFSWQKLQEQT 196

  Fly   204 V-SDVEDQYMTRLENVAINECCCLVYTSGTVGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAESI 267
            . |:::::.:.|...:..|||..|::|||||||||.|||||||:.||.:.....|..:.||.||.
  Fly   197 FSSELKEELLARESRIRANECAMLIFTSGTVGMPKAVMLSHDNLVFDTKSAAAHMQDIQVGKESF 261

  Fly   268 VSYLPLSHVAAQTVDIYTCAFVAGCIWFADKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMV 332
            ||||||||||||..|::.....|||:.|||||||||||:|:.:.||||:..|||||:||.|||:|
  Fly   262 VSYLPLSHVAAQIFDVFLGLSHAGCVTFADKDALKGTLIKTFRKARPTKMFGVPRVFEKLQERLV 326

  Fly   333 AVASSSGSLKKMLASWAKGITLKHY-MVSQGKSS---GGFRYKIAKSLIMSKVKQALGFDRVLTL 393
            |..:.:....::|.:.|:....:|. .:..|||.   |..:|.:| ..::..:::.:|.|.....
  Fly   327 AAEAKARPYSRLLLARARAAVAEHQTTLMAGKSPSIYGNAKYWLA-CRVVKPIREMIGVDNCRVF 390

  Fly   394 ASAAAPMSPETKKYFLSLDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLPGCESKFINKDAN 458
            .:..||.|.|.|::||.||:.:.:.:|||||:|..|:.: |...|.:.|:...|...|....|.|
  Fly   391 FTGGAPTSEELKQFFLGLDIALGECYGMSETSGAITLNV-DISNLYSAGQACEGVTLKIHEPDCN 454

  Fly   459 GHGELCIRGRHVFMGYIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENI 523
            |.||:.:|||.|||||:...:||||::.:|.||||||||::|.||.:.::||.||:|||||||||
  Fly   455 GQGEILMRGRLVFMGYLGLPDKTEETVKEDGWLHSGDLGYIDPKGNLIISGRLKELIITAGGENI 519

  Fly   524 PPVHIENTIKKELDAISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEH 588
            ||||||..|||||..:||..|:|:.|||||||::|||:.|..:|.|||.|..|:..|::.|.:..
  Fly   520 PPVHIEELIKKELPCVSNVLLIGDHRKYLTVLLSLKTKCDAKTGIPLDALREETIEWLRDLDIHE 584

  Fly   589 KTVSDIL------------AAGPC-------PKVWKSIEDAIKRANKQSISNAQKVQKFTILPHD 634
            ..:|::|            ||...       ||:.::||:.||||||.:||||||||||.::.|:
  Fly   585 TRLSELLNIPADLQLPNDTAALAATLEITAKPKLLEAIEEGIKRANKYAISNAQKVQKFALIAHE 649

  Fly   635 FSIPTGELGPTLKVKRNVVSKMYADEIEKLY 665
            ||:.|||||||||::||:|...||..||:||
  Fly   650 FSVATGELGPTLKIRRNIVHAKYAKVIERLY 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 294/663 (44%)
ACSBG_like 69..665 CDD:213299 282/619 (46%)
hllNP_609696.1 AFD_class_I 62..680 CDD:388389 282/619 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447028
Domainoid 1 1.000 145 1.000 Domainoid score I4520
eggNOG 1 0.900 - - E1_COG1022
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 537 1.000 Inparanoid score I1198
Isobase 1 0.950 - 0 Normalized mean entropy S3416
OMA 1 1.010 - - QHG58630
OrthoDB 1 1.010 - - D218492at33208
OrthoFinder 1 1.000 - - FOG0003543
OrthoInspector 1 1.000 - - mtm6618
orthoMCL 1 0.900 - - OOG6_101481
Panther 1 1.100 - - P PTHR24096
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6795
SonicParanoid 1 1.000 - - X2420
1413.790

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