DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgm and pdgy

DIOPT Version :9

Sequence 1:NP_001285923.1 Gene:bgm / 44117 FlyBaseID:FBgn0027348 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001188590.1 Gene:pdgy / 32426 FlyBaseID:FBgn0027601 Length:597 Species:Drosophila melanogaster


Alignment Length:681 Identity:152/681 - (22%)
Similarity:264/681 - (38%) Gaps:166/681 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RLRQADAY--------------RTTNRQDAVKIR-------------MAKDG---IGAEEPISVP 49
            |:|.|.|:              |||:...|.:.|             ..:||   ....:|:::|
  Fly     9 RMRSATAFGSAATRSITTNRRQRTTSTASAQRERTQSVSETDKFLHYSPEDGYYKTSPFDPVTIP 73

  Fly    50 GL-LKRTVNNYGDYPALRTKNGKNGYHTVTYKQYE-QKVHQVAKAF-----IKLGLEEHHSVGVL 107
            .: |...|  :.|:.....:..  ....:|.:||. .::...:.||     .|..|::...:.:.
  Fly    74 NVPLHEYV--WRDFKKWERRTA--AVCVITDRQYTFAQMRDASAAFAVRLQTKFNLQKPDVLAIC 134

  Fly   108 AFNCAEWFYSAMGAIHARGIIAGIYTTNSADAVQHVLESSHAQIVV-----VDDAKQMDKIHAIR 167
            ..|..|:..:.:|||.|...:..:....:.|.:...|..|.|:.:|     .....|..|:...:
  Fly   135 LPNLPEYPIATLGAIEAGLTVTTVNPVYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQ 199

  Fly   168 DKLPKLKAAIQIQEPYSPYLKKEDGYYRWSEIESMNVSDVEDQYMTRLENVAINECCCLVYTSGT 232
            ..:..::.:.:...|        :|...:||:.|......||  :...:..:.::...|.::|||
  Fly   200 IPIAVVRTSAEEALP--------EGAIDFSELTSTQNVRYED--LKAPKEASADDMVFLPFSSGT 254

  Fly   233 VGMPKGVMLSHDNITFDVRGIVKAMDRVVVGAE-SIVSYLPLSHVAAQTVDIYTCAFVAGCIWFA 296
            .|:||||||||:|||.:...:..::...::|.: ::...||..|:...|| :.......||    
  Fly   255 TGLPKGVMLSHNNITSNCEQVQASLPLDLMGPQNTLPGVLPFFHIYGLTV-VMLSKLGQGC---- 314

  Fly   297 DKDALKGTLVKSLQDARPTRFMGVPRVYEKFQERMVAVASSSGSLKKMLASWAKGI--------- 352
                    .:.::...:|..||   |..:|:|          ||:..::...|..:         
  Fly   315 --------RLATMPCFKPDDFM---RSLDKYQ----------GSILNLVPPIALFMINHPKLTQE 358

  Fly   353 TLKHY-MVSQGKSSGG------FRYKIAKSLIMSKVKQALGFDRVLTLASAAAPMSPETKKYFLS 410
            |..|. :|..|.:..|      |..|...::.    ||..|    :|.||....::||..|.:.|
  Fly   359 TAPHLKVVMSGAAPIGQHDVERFLNKFPNTVF----KQGYG----MTEASPVVLLTPEGNKVYAS 415

  Fly   411 LDLKIVDAFGMSETAGCHTICLPDSVGLNTIGKTLP--GCESKFINKDANGHGELCIRGRHVFMG 473
                              |..||.|    |..|.:|  |.::|.:.....  ||||:||..|..|
  Fly   416 ------------------TGVLPAS----TEAKIVPLDGSDAKGVGPRTT--GELCVRGPQVMAG 456

  Fly   474 YIDNKEKTEESLDDDCWLHSGDLGFVDDKGYVSLTGRSKEIIITAGGENIPPVHIENTIK---KE 535
            |::|.|..:.:.....||.|||:.|.|:.|...:|.|.||:|...|.: :||..:|..::   |.
  Fly   457 YLNNDEANQVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQ-VPPAELEAVLRDHPKI 520

  Fly   536 LDA----ISNAFLVGEQRKYLTVLITLKTEVDKDSGEPLDELSHESSVWVKSLGVEHKTVS---- 592
            |:|    |.:.| .||..:.:.||    .:.:|.|.|       |.|.:|......:|.:.    
  Fly   521 LEAAVFGIPHEF-NGEAPRAIVVL----RQGEKASAE-------EISAYVAERVAHYKKLEGGVI 573

  Fly   593 --DILAAGPCPKVWKSIEDAIKRANKQSISN 621
              |.:...|..|:       ::|..|:..|:
  Fly   574 FVDEVPKNPTGKI-------LRRELKEKFSD 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgmNP_001285923.1 FAA1 32..666 CDD:223953 144/650 (22%)
ACSBG_like 69..665 CDD:213299 136/596 (23%)
pdgyNP_001188590.1 CaiC 77..595 CDD:223395 138/609 (23%)
Firefly_Luc_like 99..587 CDD:213279 133/575 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452135
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24096
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.